diff options
| author | Campbell Barton <ideasman42@gmail.com> | 2011-11-08 10:24:54 +0400 |
|---|---|---|
| committer | Campbell Barton <ideasman42@gmail.com> | 2011-11-08 10:24:54 +0400 |
| commit | 3e28b15f2aa2be1265977d14eb78122bae3e1096 (patch) | |
| tree | 799ab47ee129e31cf5142ede413cc3187b6ee6a0 /io_mesh_pdb | |
| parent | 04b24dbfe33c9dc657efc858de87c3b1e308f884 (diff) | |
minor edits
Diffstat (limited to 'io_mesh_pdb')
| -rw-r--r-- | io_mesh_pdb/import_pdb.py | 17 |
1 files changed, 9 insertions, 8 deletions
diff --git a/io_mesh_pdb/import_pdb.py b/io_mesh_pdb/import_pdb.py index 8c4ab70c..6b39a78c 100644 --- a/io_mesh_pdb/import_pdb.py +++ b/io_mesh_pdb/import_pdb.py @@ -226,8 +226,6 @@ def load_pdb(context, scene = context.scene file = open(filepath, 'r') - lines = file.readlines() - file.close() model_list = {} model_flag = False @@ -239,7 +237,7 @@ def load_pdb(context, # ------------------------------------------------------------------------- # Parse data - for line in lines: + for line in file: # print(line) if line[:6] == 'COMPND': if line[11:17] == 'CHAIN:': @@ -366,15 +364,18 @@ def load_pdb(context, tempfactor, element, charge) + file.close() + if (not multimers) or (not biomolecule_flag): # Create a default biomolecule w/ all chains and identity transform # Overwrites original biomolecule_list biomolecule_flag = True - biomolecule_list = {1: Biomolecule(1)} - biomolecule_list[1].chain_transforms[tuple(chain_list)] = [] - biomolecule_list[1].chain_transforms[tuple(chain_list)].append([[1, 0, 0, 0], - [0, 1, 0, 0], - [0, 0, 1, 0]]) + bm_serial = 1 + biomolecule = Biomolecule(bm_serial) + biomolecule.chain_transforms[tuple(chain_list)] = [(((1.0, 0.0, 0.0, 0.0), + (0.0, 1.0, 0.0, 0.0), + (0.0, 0.0, 1.0, 0.0)))] + biomolecule_list = {bm_serial: biomolecule} # ------------------------------------------------------------------------- # Create atom mesh template |