/** \file smemory.c * \ingroup opennl */ /* * -- SuperLU routine (version 3.0) -- * Univ. of California Berkeley, Xerox Palo Alto Research Center, * and Lawrence Berkeley National Lab. * October 15, 2003 * */ #include "ssp_defs.h" /* blender only: needed for int_ptr, no other BLI used here */ #include "../../../source/blender/blenlib/BLI_sys_types.h" /* Constants */ #define NO_MEMTYPE 4 /* 0: lusup; 1: ucol; 2: lsub; 3: usub */ #define GluIntArray(n) (5 * (n) + 5) /* Internal prototypes */ void *sexpand (int *, MemType,int, int, GlobalLU_t *); int sLUWorkInit (int, int, int, int **, double **, LU_space_t); void copy_mem_double (int, void *, void *); void sStackCompress (GlobalLU_t *); void sSetupSpace (void *, int, LU_space_t *); void *suser_malloc (int, int); void suser_free (int, int); /* External prototypes (in memory.c - prec-indep) */ extern void copy_mem_int (int, void *, void *); extern void user_bcopy (char *, char *, int); /* Headers for 4 types of dynamatically managed memory */ typedef struct e_node { int size; /* length of the memory that has been used */ void *mem; /* pointer to the new malloc'd store */ } ExpHeader; typedef struct { int size; int used; int top1; /* grow upward, relative to &array[0] */ int top2; /* grow downward */ void *array; } LU_stack_t; /* Variables local to this file */ static ExpHeader *expanders = 0; /* Array of pointers to 4 types of memory */ static LU_stack_t stack; static int no_expand; /* Macros to manipulate stack */ #define StackFull(x) ( x + stack.used >= stack.size ) #define NotDoubleAlign(addr) ( (intptr_t)addr & 7 ) #define DoubleAlign(addr) ( ((intptr_t)addr + 7) & ~7L ) #define TempSpace(m, w) ( (2*w + 4 + NO_MARKER) * m * sizeof(int) + \ (w + 1) * m * sizeof(double) ) #define Reduce(alpha) ((alpha + 1) / 2) /* i.e. (alpha-1)/2 + 1 */ /* * Setup the memory model to be used for factorization. * lwork = 0: use system malloc; * lwork > 0: use user-supplied work[] space. */ void sSetupSpace(void *work, int lwork, LU_space_t *MemModel) { if ( lwork == 0 ) { *MemModel = SYSTEM; /* malloc/free */ } else if ( lwork > 0 ) { *MemModel = USER; /* user provided space */ stack.used = 0; stack.top1 = 0; stack.top2 = (lwork/4)*4; /* must be word addressable */ stack.size = stack.top2; stack.array = (void *) work; } } void *suser_malloc(int bytes, int which_end) { void *buf; if ( StackFull(bytes) ) return (NULL); if ( which_end == HEAD ) { buf = (char*) stack.array + stack.top1; stack.top1 += bytes; } else { stack.top2 -= bytes; buf = (char*) stack.array + stack.top2; } stack.used += bytes; return buf; } void suser_free(int bytes, int which_end) { if ( which_end == HEAD ) { stack.top1 -= bytes; } else { stack.top2 += bytes; } stack.used -= bytes; } /* * mem_usage consists of the following fields: * - for_lu (double) * The amount of space used in bytes for the L\U data structures. * - total_needed (double) * The amount of space needed in bytes to perform factorization. * - expansions (int) * Number of memory expansions during the LU factorization. */ int sQuerySpace(SuperMatrix *L, SuperMatrix *U, mem_usage_t *mem_usage) { SCformat *Lstore; NCformat *Ustore; register int n, iword, dword, panel_size = sp_ienv(1); Lstore = L->Store; Ustore = U->Store; n = L->ncol; iword = sizeof(int); dword = sizeof(double); /* For LU factors */ mem_usage->for_lu = (double)( (4*n + 3) * iword + Lstore->nzval_colptr[n] * dword + Lstore->rowind_colptr[n] * iword ); mem_usage->for_lu += (double)( (n + 1) * iword + Ustore->colptr[n] * (dword + iword) ); /* Working storage to support factorization */ mem_usage->total_needed = mem_usage->for_lu + (double)( (2 * panel_size + 4 + NO_MARKER) * n * iword + (panel_size + 1) * n * dword ); mem_usage->expansions = --no_expand; return 0; } /* sQuerySpace */ /* * Allocate storage for the data structures common to all factor routines. * For those unpredictable size, make a guess as FILL * nnz(A). * Return value: * If lwork = -1, return the estimated amount of space required, plus n; * otherwise, return the amount of space actually allocated when * memory allocation failure occurred. */ int sLUMemInit(fact_t fact, void *work, int lwork, int m, int n, int annz, int panel_size, SuperMatrix *L, SuperMatrix *U, GlobalLU_t *Glu, int **iwork, double **dwork) { int info, iword, dword; SCformat *Lstore; NCformat *Ustore; int *xsup, *supno; int *lsub, *xlsub; double *lusup; int *xlusup; double *ucol; int *usub, *xusub; int nzlmax, nzumax, nzlumax; int FILL = sp_ienv(6); Glu->n = n; no_expand = 0; iword = sizeof(int); dword = sizeof(double); if ( !expanders ) expanders = (ExpHeader*)SUPERLU_MALLOC(NO_MEMTYPE * sizeof(ExpHeader)); if ( !expanders ) ABORT("SUPERLU_MALLOC fails for expanders"); if ( fact != SamePattern_SameRowPerm ) { /* Guess for L\U factors */ nzumax = nzlumax = FILL * annz; nzlmax = SUPERLU_MAX(1, FILL/4.) * annz; if ( lwork == -1 ) { return ( GluIntArray(n) * iword + TempSpace(m, panel_size) + (nzlmax+nzumax)*iword + (nzlumax+nzumax)*dword + n ); } else { sSetupSpace(work, lwork, &Glu->MemModel); } #ifdef DEBUG printf("sLUMemInit() called: annz %d, MemModel %d\n", annz, Glu->MemModel); #endif /* Integer pointers for L\U factors */ if ( Glu->MemModel == SYSTEM ) { xsup = intMalloc(n+1); supno = intMalloc(n+1); xlsub = intMalloc(n+1); xlusup = intMalloc(n+1); xusub = intMalloc(n+1); } else { xsup = (int *)suser_malloc((n+1) * iword, HEAD); supno = (int *)suser_malloc((n+1) * iword, HEAD); xlsub = (int *)suser_malloc((n+1) * iword, HEAD); xlusup = (int *)suser_malloc((n+1) * iword, HEAD); xusub = (int *)suser_malloc((n+1) * iword, HEAD); } lusup = (double *) sexpand( &nzlumax, LUSUP, 0, 0, Glu ); ucol = (double *) sexpand( &nzumax, UCOL, 0, 0, Glu ); lsub = (int *) sexpand( &nzlmax, LSUB, 0, 0, Glu ); usub = (int *) sexpand( &nzumax, USUB, 0, 1, Glu ); while ( !lusup || !ucol || !lsub || !usub ) { if ( Glu->MemModel == SYSTEM ) { SUPERLU_FREE(lusup); SUPERLU_FREE(ucol); SUPERLU_FREE(lsub); SUPERLU_FREE(usub); } else { suser_free((nzlumax+nzumax)*dword+(nzlmax+nzumax)*iword, HEAD); } nzlumax /= 2; nzumax /= 2; nzlmax /= 2; if ( nzlumax < annz ) { printf("Not enough memory to perform factorization.\n"); return (smemory_usage(nzlmax, nzumax, nzlumax, n) + n); } lusup = (double *) sexpand( &nzlumax, LUSUP, 0, 0, Glu ); ucol = (double *) sexpand( &nzumax, UCOL, 0, 0, Glu ); lsub = (int *) sexpand( &nzlmax, LSUB, 0, 0, Glu ); usub = (int *) sexpand( &nzumax, USUB, 0, 1, Glu ); } } else { /* fact == SamePattern_SameRowPerm */ Lstore = L->Store; Ustore = U->Store; xsup = Lstore->sup_to_col; supno = Lstore->col_to_sup; xlsub = Lstore->rowind_colptr; xlusup = Lstore->nzval_colptr; xusub = Ustore->colptr; nzlmax = Glu->nzlmax; /* max from previous factorization */ nzumax = Glu->nzumax; nzlumax = Glu->nzlumax; if ( lwork == -1 ) { return ( GluIntArray(n) * iword + TempSpace(m, panel_size) + (nzlmax+nzumax)*iword + (nzlumax+nzumax)*dword + n ); } else if ( lwork == 0 ) { Glu->MemModel = SYSTEM; } else { Glu->MemModel = USER; stack.top2 = (lwork/4)*4; /* must be word-addressable */ stack.size = stack.top2; } lsub = expanders[LSUB].mem = Lstore->rowind; lusup = expanders[LUSUP].mem = Lstore->nzval; usub = expanders[USUB].mem = Ustore->rowind; ucol = expanders[UCOL].mem = Ustore->nzval;; expanders[LSUB].size = nzlmax; expanders[LUSUP].size = nzlumax; expanders[USUB].size = nzumax; expanders[UCOL].size = nzumax; } Glu->xsup = xsup; Glu->supno = supno; Glu->lsub = lsub; Glu->xlsub = xlsub; Glu->lusup = lusup; Glu->xlusup = xlusup; Glu->ucol = ucol; Glu->usub = usub; Glu->xusub = xusub; Glu->nzlmax = nzlmax; Glu->nzumax = nzumax; Glu->nzlumax = nzlumax; info = sLUWorkInit(m, n, panel_size, iwork, dwork, Glu->MemModel); if ( info ) return ( info + smemory_usage(nzlmax, nzumax, nzlumax, n) + n); ++no_expand; return 0; } /* sLUMemInit */ /* Allocate known working storage. Returns 0 if success, otherwise returns the number of bytes allocated so far when failure occurred. */ int sLUWorkInit(int m, int n, int panel_size, int **iworkptr, double **dworkptr, LU_space_t MemModel) { int isize, dsize, extra; double *old_ptr; int maxsuper = sp_ienv(3), rowblk = sp_ienv(4); isize = ( (2 * panel_size + 3 + NO_MARKER ) * m + n ) * sizeof(int); dsize = (m * panel_size + NUM_TEMPV(m,panel_size,maxsuper,rowblk)) * sizeof(double); if ( MemModel == SYSTEM ) *iworkptr = (int *) intCalloc(isize/sizeof(int)); else *iworkptr = (int *) suser_malloc(isize, TAIL); if ( ! *iworkptr ) { fprintf(stderr, "sLUWorkInit: malloc fails for local iworkptr[]\n"); return (isize + n); } if ( MemModel == SYSTEM ) *dworkptr = (double *) SUPERLU_MALLOC(dsize); else { *dworkptr = (double *) suser_malloc(dsize, TAIL); if ( NotDoubleAlign(*dworkptr) ) { old_ptr = *dworkptr; *dworkptr = (double*) DoubleAlign(*dworkptr); *dworkptr = (double*) ((double*)*dworkptr - 1); extra = (char*)old_ptr - (char*)*dworkptr; #ifdef DEBUG printf("sLUWorkInit: not aligned, extra %d\n", extra); #endif stack.top2 -= extra; stack.used += extra; } } if ( ! *dworkptr ) { fprintf(stderr, "malloc fails for local dworkptr[]."); return (isize + dsize + n); } return 0; } /* * Set up pointers for real working arrays. */ void sSetRWork(int m, int panel_size, double *dworkptr, double **dense, double **tempv) { double zero = 0.0; int maxsuper = sp_ienv(3), rowblk = sp_ienv(4); *dense = dworkptr; *tempv = *dense + panel_size*m; sfill (*dense, m * panel_size, zero); sfill (*tempv, NUM_TEMPV(m,panel_size,maxsuper,rowblk), zero); } /* * Free the working storage used by factor routines. */ void sLUWorkFree(int *iwork, double *dwork, GlobalLU_t *Glu) { if ( Glu->MemModel == SYSTEM ) { SUPERLU_FREE (iwork); SUPERLU_FREE (dwork); } else { stack.used -= (stack.size - stack.top2); stack.top2 = stack.size; /* sStackCompress(Glu); */ } SUPERLU_FREE (expanders); expanders = 0; } /* Expand the data structures for L and U during the factorization. * Return value: 0 - successful return * > 0 - number of bytes allocated when run out of space */ int sLUMemXpand(int jcol, int next, /* number of elements currently in the factors */ MemType mem_type, /* which type of memory to expand */ int *maxlen, /* modified - maximum length of a data structure */ GlobalLU_t *Glu /* modified - global LU data structures */ ) { void *new_mem; #ifdef DEBUG printf("sLUMemXpand(): jcol %d, next %d, maxlen %d, MemType %d\n", jcol, next, *maxlen, mem_type); #endif if (mem_type == USUB) new_mem = sexpand(maxlen, mem_type, next, 1, Glu); else new_mem = sexpand(maxlen, mem_type, next, 0, Glu); if ( !new_mem ) { int nzlmax = Glu->nzlmax; int nzumax = Glu->nzumax; int nzlumax = Glu->nzlumax; fprintf(stderr, "Can't expand MemType %d: jcol %d\n", mem_type, jcol); return (smemory_usage(nzlmax, nzumax, nzlumax, Glu->n) + Glu->n); } switch ( mem_type ) { case LUSUP: Glu->lusup = (double *) new_mem; Glu->nzlumax = *maxlen; break; case UCOL: Glu->ucol = (double *) new_mem; Glu->nzumax = *maxlen; break; case LSUB: Glu->lsub = (int *) new_mem; Glu->nzlmax = *maxlen; break; case USUB: Glu->usub = (int *) new_mem; Glu->nzumax = *maxlen; break; } return 0; } void copy_mem_double(int howmany, void *old, void *new) { register int i; double *dold = old; double *dnew = new; for (i = 0; i < howmany; i++) dnew[i] = dold[i]; } /* * Expand the existing storage to accommodate more fill-ins. */ void *sexpand ( int *prev_len, /* length used from previous call */ MemType type, /* which part of the memory to expand */ int len_to_copy, /* size of the memory to be copied to new store */ int keep_prev, /* = 1: use prev_len; = 0: compute new_len to expand */ GlobalLU_t *Glu /* modified - global LU data structures */ ) { double EXPAND = 1.5; double alpha; void *new_mem, *old_mem; int new_len, tries, lword, extra, bytes_to_copy; alpha = EXPAND; if ( no_expand == 0 || keep_prev ) /* First time allocate requested */ new_len = *prev_len; else { new_len = alpha * *prev_len; } if ( type == LSUB || type == USUB ) lword = sizeof(int); else lword = sizeof(double); if ( Glu->MemModel == SYSTEM ) { new_mem = (void *) SUPERLU_MALLOC(new_len * lword); /* new_mem = (void *) calloc(new_len, lword); */ if ( no_expand != 0 ) { tries = 0; if ( keep_prev ) { if ( !new_mem ) return (NULL); } else { while ( !new_mem ) { if ( ++tries > 10 ) return (NULL); alpha = Reduce(alpha); new_len = alpha * *prev_len; new_mem = (void *) SUPERLU_MALLOC(new_len * lword); /* new_mem = (void *) calloc(new_len, lword); */ } } if ( type == LSUB || type == USUB ) { copy_mem_int(len_to_copy, expanders[type].mem, new_mem); } else { copy_mem_double(len_to_copy, expanders[type].mem, new_mem); } SUPERLU_FREE (expanders[type].mem); } expanders[type].mem = (void *) new_mem; } else { /* MemModel == USER */ if ( no_expand == 0 ) { new_mem = suser_malloc(new_len * lword, HEAD); if ( NotDoubleAlign(new_mem) && (type == LUSUP || type == UCOL) ) { old_mem = new_mem; new_mem = (void *)DoubleAlign(new_mem); extra = (char*)new_mem - (char*)old_mem; #ifdef DEBUG printf("expand(): not aligned, extra %d\n", extra); #endif stack.top1 += extra; stack.used += extra; } expanders[type].mem = (void *) new_mem; } else { tries = 0; extra = (new_len - *prev_len) * lword; if ( keep_prev ) { if ( StackFull(extra) ) return (NULL); } else { while ( StackFull(extra) ) { if ( ++tries > 10 ) return (NULL); alpha = Reduce(alpha); new_len = alpha * *prev_len; extra = (new_len - *prev_len) * lword; } } if ( type != USUB ) { new_mem = (void*)((char*)expanders[type + 1].mem + extra); bytes_to_copy = (char*)stack.array + stack.top1 - (char*)expanders[type + 1].mem; user_bcopy(expanders[type+1].mem, new_mem, bytes_to_copy); if ( type < USUB ) { Glu->usub = expanders[USUB].mem = (void*)((char*)expanders[USUB].mem + extra); } if ( type < LSUB ) { Glu->lsub = expanders[LSUB].mem = (void*)((char*)expanders[LSUB].mem + extra); } if ( type < UCOL ) { Glu->ucol = expanders[UCOL].mem = (void*)((char*)expanders[UCOL].mem + extra); } stack.top1 += extra; stack.used += extra; if ( type == UCOL ) { stack.top1 += extra; /* Add same amount for USUB */ stack.used += extra; } } /* if ... */ } /* else ... */ } expanders[type].size = new_len; *prev_len = new_len; if ( no_expand ) ++no_expand; return (void *) expanders[type].mem; } /* sexpand */ /* * Compress the work[] array to remove fragmentation. */ void sStackCompress(GlobalLU_t *Glu) { register int iword, dword, ndim; char *last, *fragment; int *ifrom, *ito; double *dfrom, *dto; int *xlsub, *lsub, *xusub, *usub, *xlusup; double *ucol, *lusup; iword = sizeof(int); dword = sizeof(double); ndim = Glu->n; xlsub = Glu->xlsub; lsub = Glu->lsub; xusub = Glu->xusub; usub = Glu->usub; xlusup = Glu->xlusup; ucol = Glu->ucol; lusup = Glu->lusup; dfrom = ucol; dto = (double *)((char*)lusup + xlusup[ndim] * dword); copy_mem_double(xusub[ndim], dfrom, dto); ucol = dto; ifrom = lsub; ito = (int *) ((char*)ucol + xusub[ndim] * iword); copy_mem_int(xlsub[ndim], ifrom, ito); lsub = ito; ifrom = usub; ito = (int *) ((char*)lsub + xlsub[ndim] * iword); copy_mem_int(xusub[ndim], ifrom, ito); usub = ito; last = (char*)usub + xusub[ndim] * iword; fragment = (char*) (((char*)stack.array + stack.top1) - last); stack.used -= (intptr_t) fragment; stack.top1 -= (intptr_t) fragment; Glu->ucol = ucol; Glu->lsub = lsub; Glu->usub = usub; #ifdef DEBUG printf("sStackCompress: fragment %d\n", (int)*fragment); /* for (last = 0; last < ndim; ++last) print_lu_col("After compress:", last, 0);*/ #endif } /* * Allocate storage for original matrix A */ void sallocateA(int n, int nnz, double **a, int **asub, int **xa) { *a = (double *) doubleMalloc(nnz); *asub = (int *) intMalloc(nnz); *xa = (int *) intMalloc(n+1); } double *doubleMalloc(int n) { double *buf; buf = (double *) SUPERLU_MALLOC(n * sizeof(double)); if ( !buf ) { ABORT("SUPERLU_MALLOC failed for buf in doubleMalloc()\n"); } return (buf); } double *doubleCalloc(int n) { double *buf; register int i; double zero = 0.0; buf = (double *) SUPERLU_MALLOC(n * sizeof(double)); if ( !buf ) { ABORT("SUPERLU_MALLOC failed for buf in doubleCalloc()\n"); } for (i = 0; i < n; ++i) buf[i] = zero; return (buf); } int smemory_usage(const int nzlmax, const int nzumax, const int nzlumax, const int n) { register int iword, dword; iword = sizeof(int); dword = sizeof(double); return (10 * n * iword + nzlmax * iword + nzumax * (iword + dword) + nzlumax * dword); }