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Diffstat (limited to 'extern/Eigen3/Eigen/src/Sparse/SparseSparseProduct.h')
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+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
+//
+// Eigen is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 3 of the License, or (at your option) any later version.
+//
+// Alternatively, you can redistribute it and/or
+// modify it under the terms of the GNU General Public License as
+// published by the Free Software Foundation; either version 2 of
+// the License, or (at your option) any later version.
+//
+// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
+// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
+// GNU General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License and a copy of the GNU General Public License along with
+// Eigen. If not, see <http://www.gnu.org/licenses/>.
+
+#ifndef EIGEN_SPARSESPARSEPRODUCT_H
+#define EIGEN_SPARSESPARSEPRODUCT_H
+
+namespace internal {
+
+template<typename Lhs, typename Rhs, typename ResultType>
+static void sparse_product_impl2(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+{
+ typedef typename remove_all<Lhs>::type::Scalar Scalar;
+ typedef typename remove_all<Lhs>::type::Index Index;
+
+ // make sure to call innerSize/outerSize since we fake the storage order.
+ Index rows = lhs.innerSize();
+ Index cols = rhs.outerSize();
+ eigen_assert(lhs.outerSize() == rhs.innerSize());
+
+ std::vector<bool> mask(rows,false);
+ Matrix<Scalar,Dynamic,1> values(rows);
+ Matrix<Index,Dynamic,1> indices(rows);
+
+ // estimate the number of non zero entries
+ float ratioLhs = float(lhs.nonZeros())/(float(lhs.rows())*float(lhs.cols()));
+ float avgNnzPerRhsColumn = float(rhs.nonZeros())/float(cols);
+ float ratioRes = (std::min)(ratioLhs * avgNnzPerRhsColumn, 1.f);
+
+// int t200 = rows/(log2(200)*1.39);
+// int t = (rows*100)/139;
+
+ res.resize(rows, cols);
+ res.reserve(Index(ratioRes*rows*cols));
+ // we compute each column of the result, one after the other
+ for (Index j=0; j<cols; ++j)
+ {
+
+ res.startVec(j);
+ Index nnz = 0;
+ for (typename Rhs::InnerIterator rhsIt(rhs, j); rhsIt; ++rhsIt)
+ {
+ Scalar y = rhsIt.value();
+ Index k = rhsIt.index();
+ for (typename Lhs::InnerIterator lhsIt(lhs, k); lhsIt; ++lhsIt)
+ {
+ Index i = lhsIt.index();
+ Scalar x = lhsIt.value();
+ if(!mask[i])
+ {
+ mask[i] = true;
+// values[i] = x * y;
+// indices[nnz] = i;
+ ++nnz;
+ }
+ else
+ values[i] += x * y;
+ }
+ }
+ // FIXME reserve nnz non zeros
+ // FIXME implement fast sort algorithms for very small nnz
+ // if the result is sparse enough => use a quick sort
+ // otherwise => loop through the entire vector
+ // In order to avoid to perform an expensive log2 when the
+ // result is clearly very sparse we use a linear bound up to 200.
+// if((nnz<200 && nnz<t200) || nnz * log2(nnz) < t)
+// {
+// if(nnz>1) std::sort(indices.data(),indices.data()+nnz);
+// for(int k=0; k<nnz; ++k)
+// {
+// int i = indices[k];
+// res.insertBackNoCheck(j,i) = values[i];
+// mask[i] = false;
+// }
+// }
+// else
+// {
+// // dense path
+// for(int i=0; i<rows; ++i)
+// {
+// if(mask[i])
+// {
+// mask[i] = false;
+// res.insertBackNoCheck(j,i) = values[i];
+// }
+// }
+// }
+
+ }
+ res.finalize();
+}
+
+// perform a pseudo in-place sparse * sparse product assuming all matrices are col major
+template<typename Lhs, typename Rhs, typename ResultType>
+static void sparse_product_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+{
+// return sparse_product_impl2(lhs,rhs,res);
+
+ typedef typename remove_all<Lhs>::type::Scalar Scalar;
+ typedef typename remove_all<Lhs>::type::Index Index;
+
+ // make sure to call innerSize/outerSize since we fake the storage order.
+ Index rows = lhs.innerSize();
+ Index cols = rhs.outerSize();
+ //int size = lhs.outerSize();
+ eigen_assert(lhs.outerSize() == rhs.innerSize());
+
+ // allocate a temporary buffer
+ AmbiVector<Scalar,Index> tempVector(rows);
+
+ // estimate the number of non zero entries
+ float ratioLhs = float(lhs.nonZeros())/(float(lhs.rows())*float(lhs.cols()));
+ float avgNnzPerRhsColumn = float(rhs.nonZeros())/float(cols);
+ float ratioRes = (std::min)(ratioLhs * avgNnzPerRhsColumn, 1.f);
+
+ // mimics a resizeByInnerOuter:
+ if(ResultType::IsRowMajor)
+ res.resize(cols, rows);
+ else
+ res.resize(rows, cols);
+
+ res.reserve(Index(ratioRes*rows*cols));
+ for (Index j=0; j<cols; ++j)
+ {
+ // let's do a more accurate determination of the nnz ratio for the current column j of res
+ //float ratioColRes = (std::min)(ratioLhs * rhs.innerNonZeros(j), 1.f);
+ // FIXME find a nice way to get the number of nonzeros of a sub matrix (here an inner vector)
+ float ratioColRes = ratioRes;
+ tempVector.init(ratioColRes);
+ tempVector.setZero();
+ for (typename Rhs::InnerIterator rhsIt(rhs, j); rhsIt; ++rhsIt)
+ {
+ // FIXME should be written like this: tmp += rhsIt.value() * lhs.col(rhsIt.index())
+ tempVector.restart();
+ Scalar x = rhsIt.value();
+ for (typename Lhs::InnerIterator lhsIt(lhs, rhsIt.index()); lhsIt; ++lhsIt)
+ {
+ tempVector.coeffRef(lhsIt.index()) += lhsIt.value() * x;
+ }
+ }
+ res.startVec(j);
+ for (typename AmbiVector<Scalar,Index>::Iterator it(tempVector); it; ++it)
+ res.insertBackByOuterInner(j,it.index()) = it.value();
+ }
+ res.finalize();
+}
+
+template<typename Lhs, typename Rhs, typename ResultType,
+ int LhsStorageOrder = traits<Lhs>::Flags&RowMajorBit,
+ int RhsStorageOrder = traits<Rhs>::Flags&RowMajorBit,
+ int ResStorageOrder = traits<ResultType>::Flags&RowMajorBit>
+struct sparse_product_selector;
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector<Lhs,Rhs,ResultType,ColMajor,ColMajor,ColMajor>
+{
+ typedef typename traits<typename remove_all<Lhs>::type>::Scalar Scalar;
+
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+// std::cerr << __LINE__ << "\n";
+ typename remove_all<ResultType>::type _res(res.rows(), res.cols());
+ sparse_product_impl<Lhs,Rhs,ResultType>(lhs, rhs, _res);
+ res.swap(_res);
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector<Lhs,Rhs,ResultType,ColMajor,ColMajor,RowMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+// std::cerr << __LINE__ << "\n";
+ // we need a col-major matrix to hold the result
+ typedef SparseMatrix<typename ResultType::Scalar> SparseTemporaryType;
+ SparseTemporaryType _res(res.rows(), res.cols());
+ sparse_product_impl<Lhs,Rhs,SparseTemporaryType>(lhs, rhs, _res);
+ res = _res;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector<Lhs,Rhs,ResultType,RowMajor,RowMajor,RowMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+// std::cerr << __LINE__ << "\n";
+ // let's transpose the product to get a column x column product
+ typename remove_all<ResultType>::type _res(res.rows(), res.cols());
+ sparse_product_impl<Rhs,Lhs,ResultType>(rhs, lhs, _res);
+ res.swap(_res);
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector<Lhs,Rhs,ResultType,RowMajor,RowMajor,ColMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+// std::cerr << "here...\n";
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+ ColMajorMatrix colLhs(lhs);
+ ColMajorMatrix colRhs(rhs);
+// std::cerr << "more...\n";
+ sparse_product_impl<ColMajorMatrix,ColMajorMatrix,ResultType>(colLhs, colRhs, res);
+// std::cerr << "OK.\n";
+
+ // let's transpose the product to get a column x column product
+
+// typedef SparseMatrix<typename ResultType::Scalar> SparseTemporaryType;
+// SparseTemporaryType _res(res.cols(), res.rows());
+// sparse_product_impl<Rhs,Lhs,SparseTemporaryType>(rhs, lhs, _res);
+// res = _res.transpose();
+ }
+};
+
+// NOTE the 2 others cases (col row *) must never occur since they are caught
+// by ProductReturnType which transforms it to (col col *) by evaluating rhs.
+
+} // end namespace internal
+
+// sparse = sparse * sparse
+template<typename Derived>
+template<typename Lhs, typename Rhs>
+inline Derived& SparseMatrixBase<Derived>::operator=(const SparseSparseProduct<Lhs,Rhs>& product)
+{
+// std::cerr << "there..." << typeid(Lhs).name() << " " << typeid(Lhs).name() << " " << (Derived::Flags&&RowMajorBit) << "\n";
+ internal::sparse_product_selector<
+ typename internal::remove_all<Lhs>::type,
+ typename internal::remove_all<Rhs>::type,
+ Derived>::run(product.lhs(),product.rhs(),derived());
+ return derived();
+}
+
+namespace internal {
+
+template<typename Lhs, typename Rhs, typename ResultType,
+ int LhsStorageOrder = traits<Lhs>::Flags&RowMajorBit,
+ int RhsStorageOrder = traits<Rhs>::Flags&RowMajorBit,
+ int ResStorageOrder = traits<ResultType>::Flags&RowMajorBit>
+struct sparse_product_selector2;
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,ColMajor,ColMajor,ColMajor>
+{
+ typedef typename traits<typename remove_all<Lhs>::type>::Scalar Scalar;
+
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ sparse_product_impl2<Lhs,Rhs,ResultType>(lhs, rhs, res);
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,RowMajor,ColMajor,ColMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ // prevent warnings until the code is fixed
+ EIGEN_UNUSED_VARIABLE(lhs);
+ EIGEN_UNUSED_VARIABLE(rhs);
+ EIGEN_UNUSED_VARIABLE(res);
+
+// typedef SparseMatrix<typename ResultType::Scalar,RowMajor> RowMajorMatrix;
+// RowMajorMatrix rhsRow = rhs;
+// RowMajorMatrix resRow(res.rows(), res.cols());
+// sparse_product_impl2<RowMajorMatrix,Lhs,RowMajorMatrix>(rhsRow, lhs, resRow);
+// res = resRow;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,ColMajor,RowMajor,ColMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,RowMajor> RowMajorMatrix;
+ RowMajorMatrix lhsRow = lhs;
+ RowMajorMatrix resRow(res.rows(), res.cols());
+ sparse_product_impl2<Rhs,RowMajorMatrix,RowMajorMatrix>(rhs, lhsRow, resRow);
+ res = resRow;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,RowMajor,RowMajor,ColMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,RowMajor> RowMajorMatrix;
+ RowMajorMatrix resRow(res.rows(), res.cols());
+ sparse_product_impl2<Rhs,Lhs,RowMajorMatrix>(rhs, lhs, resRow);
+ res = resRow;
+ }
+};
+
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,ColMajor,ColMajor,RowMajor>
+{
+ typedef typename traits<typename remove_all<Lhs>::type>::Scalar Scalar;
+
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+ ColMajorMatrix resCol(res.rows(), res.cols());
+ sparse_product_impl2<Lhs,Rhs,ColMajorMatrix>(lhs, rhs, resCol);
+ res = resCol;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,RowMajor,ColMajor,RowMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+ ColMajorMatrix lhsCol = lhs;
+ ColMajorMatrix resCol(res.rows(), res.cols());
+ sparse_product_impl2<ColMajorMatrix,Rhs,ColMajorMatrix>(lhsCol, rhs, resCol);
+ res = resCol;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,ColMajor,RowMajor,RowMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+ ColMajorMatrix rhsCol = rhs;
+ ColMajorMatrix resCol(res.rows(), res.cols());
+ sparse_product_impl2<Lhs,ColMajorMatrix,ColMajorMatrix>(lhs, rhsCol, resCol);
+ res = resCol;
+ }
+};
+
+template<typename Lhs, typename Rhs, typename ResultType>
+struct sparse_product_selector2<Lhs,Rhs,ResultType,RowMajor,RowMajor,RowMajor>
+{
+ static void run(const Lhs& lhs, const Rhs& rhs, ResultType& res)
+ {
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+// ColMajorMatrix lhsTr(lhs);
+// ColMajorMatrix rhsTr(rhs);
+// ColMajorMatrix aux(res.rows(), res.cols());
+// sparse_product_impl2<Rhs,Lhs,ColMajorMatrix>(rhs, lhs, aux);
+// // ColMajorMatrix aux2 = aux.transpose();
+// res = aux;
+ typedef SparseMatrix<typename ResultType::Scalar,ColMajor> ColMajorMatrix;
+ ColMajorMatrix lhsCol(lhs);
+ ColMajorMatrix rhsCol(rhs);
+ ColMajorMatrix resCol(res.rows(), res.cols());
+ sparse_product_impl2<ColMajorMatrix,ColMajorMatrix,ColMajorMatrix>(lhsCol, rhsCol, resCol);
+ res = resCol;
+ }
+};
+
+} // end namespace internal
+
+template<typename Derived>
+template<typename Lhs, typename Rhs>
+inline void SparseMatrixBase<Derived>::_experimentalNewProduct(const Lhs& lhs, const Rhs& rhs)
+{
+ //derived().resize(lhs.rows(), rhs.cols());
+ internal::sparse_product_selector2<
+ typename internal::remove_all<Lhs>::type,
+ typename internal::remove_all<Rhs>::type,
+ Derived>::run(lhs,rhs,derived());
+}
+
+// sparse * sparse
+template<typename Derived>
+template<typename OtherDerived>
+inline const typename SparseSparseProductReturnType<Derived,OtherDerived>::Type
+SparseMatrixBase<Derived>::operator*(const SparseMatrixBase<OtherDerived> &other) const
+{
+ return typename SparseSparseProductReturnType<Derived,OtherDerived>::Type(derived(), other.derived());
+}
+
+#endif // EIGEN_SPARSESPARSEPRODUCT_H