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diff --git a/mgizapp/src/ForwardBackward.cpp b/mgizapp/src/ForwardBackward.cpp
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+/*
+
+Copyright (C) 1999,2000,2001 Franz Josef Och (RWTH Aachen - Lehrstuhl fuer Informatik VI)
+
+This file is part of GIZA++ ( extension of GIZA ).
+
+This program is free software; you can redistribute it and/or
+modify it under the terms of the GNU General Public License
+as published by the Free Software Foundation; either version 2
+of the License, or (at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License
+along with this program; if not, write to the Free Software
+Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307,
+USA.
+
+*/
+#ifndef NO_TRAINING
+#include "ForwardBackward.h"
+#include "Globals.h"
+#include "myassert.h"
+#include "HMMTables.h"
+#include "mymath.h"
+
+
+double ForwardBackwardTraining(const HMMNetwork&net,Array<double>&g,Array<Array2<double> >&E){
+ const int I=net.size1(),J=net.size2(),N=I*J;
+ Array<double> alpha(N,0),beta(N,0),sum(J);
+ for(int i=0;i<I;i++)
+ beta[N-I+i]=net.getBetainit(i);
+ double * cur_beta=conv<double>(beta.begin())+N-I-1;
+ for(int j=J-2;j>=0;--j)
+ for(int ti=I-1;ti>=0;--ti,--cur_beta) {
+ const double *next_beta=conv<double>(beta.begin())+(j+1)*I;
+ const double *alprob=&net.outProb(j,ti,0),*next_node=&net.nodeProb(0,j+1);
+ for(int ni=0;ni<I;++ni,(next_node+=J)){
+ massert(cur_beta<next_beta&& &net.outProb(j,ti,ni)==alprob);
+ massert(next_node == &net.nodeProb(ni,j+1));
+ /* if( VERB&&(*next_beta)*(*alprob)*(*next_node) )
+ cout << "B= " << (int)(cur_beta-beta.begin()) << " += " << (*next_beta) << "("
+ << next_beta-beta.begin() << ") alprob:" << (*alprob) << " lexprob:" << (*next_node) << endl;*/
+ (*cur_beta)+=(*next_beta++)*(*alprob++)*(*next_node);
+ }
+ }
+ for(int i=0;i<I;i++)
+ alpha[i]=net.getAlphainit(i)*net.nodeProb(i,0);
+ double* cur_alpha=conv<double>(alpha.begin())+I;
+ cur_beta=conv<double>(beta.begin())+I;
+ for(int j=1;j<J;j++){
+ Array2<double>&e=E[ (E.size()==1)?0:(j-1) ];
+ if( (E.size()!=1) || j==1 )
+ {
+ e.resize(I,I);
+ fill(e.begin(),e.end(),0.0);
+ }
+
+ for(int ti=0;ti<I;++ti,++cur_alpha,++cur_beta) {
+ const double * prev_alpha=conv<double>(alpha.begin())+I*(j-1);
+ double *cur_e= &e(ti,0);
+ double this_node=net.nodeProb(ti,j);
+ const double* alprob= &net.outProb(j-1,0,ti);
+ for(int pi=0;pi<I;++pi,++prev_alpha,(alprob+=I)){
+ massert(prev_alpha<cur_alpha&& &net.outProb(j-1,pi,ti)==alprob);
+ massert(&e(ti,pi)==cur_e);
+ const double alpha_increment= *prev_alpha*(*alprob)*this_node;
+ (*cur_alpha)+=alpha_increment;
+ (*cur_e++)+=alpha_increment*(*cur_beta);
+ }
+ }
+ }
+ g.resize(N);
+ transform(alpha.begin(),alpha.end(),beta.begin(),g.begin(),multiplies<double>());
+ double bsum=0,esum=0,esum2;
+ for(int i=0;i<I;i++)
+ bsum+=beta[i]*net.nodeProb(i,0)*net.getAlphainit(i);
+ for(unsigned int j=0;j<(unsigned int)E.size();j++)
+ {
+ Array2<double>&e=E[j];
+ const double *epe=e.end();
+ for(const double*ep=e.begin();ep!=epe;++ep)
+ esum+=*ep;
+ }
+ if( J>1 )
+ esum2=esum/(J-1);
+ else
+ esum2=0.0;
+ if(!(esum2==0.0||mfabs(esum2-bsum)/bsum<1e-3*I))
+ cout << "ERROR2: " << esum2 <<" " <<bsum << " " << esum << net << endl;
+ double * sumptr=conv<double>(sum.begin());
+ double* ge=conv<double>(g.end());
+ for(double* gp=conv<double>(g.begin());gp!=ge;gp+=I)
+ {
+ *sumptr++=normalize_if_possible(gp,gp+I);
+ if(bsum && !(mfabs((*(sumptr-1)-bsum)/bsum)<1e-3*I))
+ cout << "ERROR: " << *(sumptr-1) << " " << bsum << " " << mfabs((*(sumptr-1)-bsum)/bsum) << ' ' << I << ' ' << J << endl;
+ }
+ for(unsigned int j=0;j<(unsigned int)E.size();j++)
+ {
+ Array2<double>&e=E[j];
+ double* epe=e.end();
+ if( esum )
+ for(double*ep=e.begin();ep!=epe;++ep)
+ *ep/=esum;
+ else
+ for(double*ep=e.begin();ep!=epe;++ep)
+ *ep/=1.0/(max(I*I,I*I*(J-1)));
+ }
+ if( sum.size() )
+ return sum[0];
+ else
+ return 1.0;
+}
+void HMMViterbi(const HMMNetwork&net,Array<int>&vit) {
+ const int I=net.size1(),J=net.size2();
+ vit.resize(J);
+ Array<double>g;
+ Array<Array2<double> >e(1);
+ ForwardBackwardTraining(net,g,e);
+ for(int j=0;j<J;j++) {
+ double * begin=conv<double>(g.begin())+I*j;
+ vit[j]=max_element(begin,begin+I)-begin;
+ }
+}
+void HMMViterbi(const HMMNetwork&net,Array<double>&g,Array<int>&vit) {
+ const int I=net.size1(),J=net.size2();
+ vit.resize(J);
+ for(int j=0;j<J;j++) {
+ double* begin=conv<double>(g.begin())+I*j;
+ vit[j]=max_element(begin,begin+I)-begin;
+ }
+}
+
+double HMMRealViterbi(const HMMNetwork&net,Array<int>&vitar,int pegi,int pegj,bool verbose){
+ const int I=net.size1(),J=net.size2(),N=I*J;
+ Array<double> alpha(N,-1);
+ Array<double*> bp(N,(double*)0);
+ vitar.resize(J);
+ if( J==0 )
+ return 1.0;
+ for(int i=0;i<I;i++)
+ {
+ alpha[i]=net.getAlphainit(i)*net.nodeProb(i,0);
+ if( i>I/2 )
+ alpha[i]=0; // only first empty word can be chosen
+ bp[i]=0;
+ }
+ double *cur_alpha=conv<double>(alpha.begin())+I;
+ double **cur_bp=conv<double*>(bp.begin())+I;
+ for(int j=1;j<J;j++)
+ {
+ if( pegj+1==j)
+ for(int ti=0;ti<I;ti++)
+ if( (pegi!=-1&&ti!=pegi)||(pegi==-1&&ti<I/2) )
+ (cur_alpha-I)[ti]=0.0;
+ for(int ti=0;ti<I;++ti,++cur_alpha,++cur_bp) {
+ double* prev_alpha=conv<double>(alpha.begin())+I*(j-1);
+ double this_node=net.nodeProb(ti,j);
+ const double *alprob= &net.outProb(j-1,0,ti);
+ for(int pi=0;pi<I;++pi,++prev_alpha,(alprob+=I)){
+ massert(prev_alpha<cur_alpha&& &net.outProb(j-1,pi,ti)==alprob);
+ const double alpha_increment= *prev_alpha*(*alprob)*this_node;
+ if( alpha_increment> *cur_alpha )
+ {
+ (*cur_alpha)=alpha_increment;
+ (*cur_bp)=prev_alpha;
+ }
+ }
+ }
+ }
+ for(int i=0;i<I;i++)
+ alpha[N-I+i]*=net.getBetainit(i);
+ if( pegj==J-1)
+ for(int ti=0;ti<I;ti++)
+ if( (pegi!=-1&&ti!=pegi)||(pegi==-1&&ti<I/2) )
+ (alpha)[N-I+ti]=0.0;
+
+ int j=J-1;
+ cur_alpha=conv<double>(alpha.begin())+j*I;
+ vitar[J-1]=max_element(cur_alpha,cur_alpha+I)-cur_alpha;
+ double ret= *max_element(cur_alpha,cur_alpha+I);
+ while(bp[vitar[j]+j*I])
+ {
+ cur_alpha-=I;
+ vitar[j-1]=bp[vitar[j]+j*I]-cur_alpha;
+ massert(vitar[j-1]<I&&vitar[j-1]>=0);
+ j--;
+ }
+ massert(j==0);
+ if( verbose )
+ {
+ cout << "VERB:PEG: " << pegi << ' ' << pegj << endl;
+ for(int j=0;j<J;j++)
+ cout << "NP " << net.nodeProb(vitar[j],j) << ' ' << "AP " << ((j==0)?net.getAlphainit(vitar[j]):net.outProb(j-1,vitar[j-1],vitar[j])) << " j:" << j << " i:" << vitar[j] << "; ";
+ cout << endl;
+ }
+ return ret;
+}
+
+double MaximumTraining(const HMMNetwork&net,Array<double>&g,Array<Array2<double> >&E){
+ Array<int> vitar;
+ double ret=HMMRealViterbi(net,vitar);
+ const int I=net.size1(),J=net.size2();
+ if( E.size()==1 )
+ {
+ Array2<double>&e=E[0];
+ e.resize(I,I);
+ g.resize(I*J);
+ fill(g.begin(),g.end(),0.0);
+ fill(e.begin(),e.end(),0.0);
+ for(int i=0;i<J;++i)
+ {
+ g[i*I+vitar[i]]=1.0;
+ if( i>0 )
+ e(vitar[i],vitar[i-1])++;
+ }
+ }
+ else
+ {
+ g.resize(I*J);
+ fill(g.begin(),g.end(),0.0);
+ for(int i=0;i<J;++i)
+ {
+ g[i*I+vitar[i]]=1.0;
+ if( i>0 )
+ {
+ Array2<double>&e=E[i-1];
+ e.resize(I,I);
+ fill(e.begin(),e.end(),0.0);
+ e(vitar[i],vitar[i-1])++;
+ }
+ }
+ }
+ return ret;
+}
+
+#endif
+