[sam3] show the sam3 subfamilies in the doxygen-generated documentation

39 files changed, 1838 insertions, 3 deletions

diff --git a/doc/DoxygenLayout.xml b/doc/DoxygenLayout.xml
index 2969bb05..a01b6215 100644
--- a/doc/DoxygenLayout.xml
+++ b/doc/DoxygenLayout.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/Makefile b/doc/Makefile
index 4924543d..95e394c1 100644
--- a/doc/Makefile
+++ b/doc/Makefile
@@ -5,7 +5,7 @@
 
 doc: html latex
 
-html: cm3 usb stm32l1 stm32f0 stm32f1 stm32f2 stm32f3 stm32f4 efm32g efm32gg efm32lg efm32tg lm3s lm4f lpc13 lpc17 lpc43 top
+html: cm3 usb stm32l1 stm32f0 stm32f1 stm32f2 stm32f3 stm32f4 efm32g efm32gg efm32lg efm32tg lm3s lm4f lpc13 lpc17 lpc43 sam3a sam3n sam3s sam3u sam3x top
 
 cm3:
 	cd cm3/; doxygen
@@ -58,10 +58,25 @@ stm32f4:
 stm32l1:
 	cd stm32l1/; doxygen
 
+sam3a:
+	cd sam3a/; doxygen
+
+sam3n:
+	cd sam3n/; doxygen
+
+sam3s:
+	cd sam3s/; doxygen
+
+sam3u:
+	cd sam3u/; doxygen
+
+sam3x:
+	cd sam3x/; doxygen
+
 top:
 	doxygen
 
-latex: stm32l1.pdf stm32f0.pdf stm32f1.pdf stm32f2.pdf stm32f3.pdf stm32f4.pdf lm3s.pdf lm4f.pdf lpc13.pdf lpc17.pdf lpc43.pdf efm32g.pdf efm32gg.pdf efm32lg.pdf efm32tg.pdf
+latex: stm32l1.pdf stm32f0.pdf stm32f1.pdf stm32f2.pdf stm32f3.pdf stm32f4.pdf lm3s.pdf lm4f.pdf lpc13.pdf lpc17.pdf lpc43.pdf efm32g.pdf efm32gg.pdf efm32lg.pdf efm32tg.pdf sam3a.pdf sam3n.pdf sam3s.pdf sam3u.pdf sam3x.pdf
 
 stm32l1.pdf:
 	cd stm32l1/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../stm32l1.pdf
@@ -108,8 +123,23 @@ efm32lg.pdf:
 efm32tg.pdf:
 	cd efm32tg/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../efm32tg.pdf
 
+sam3a.pdf:
+	cd sam3a/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../sam3a.pdf
+
+sam3n.pdf:
+	cd sam3n/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../sam3n.pdf
+
+sam3s.pdf:
+	cd sam3s/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../sam3s.pdf
+
+sam3u.pdf:
+	cd sam3u/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../sam3u.pdf
+
+sam3x.pdf:
+	cd sam3x/; doxygen Doxyfile_latex; cd latex/; $(MAKE); cp refman.pdf ../../sam3x.pdf
+
 clean:
 	@rm -rf html/ */html/ */latex/ *.pdf */*.tag
 
-.PHONY: doc html cm3 usb lm3s lm4f lpc13 lpc17 lpc43 stm32l1 stm32f0 stm32f1 stm32f2 stm32f3 stm32f4 efm32g efm32gg efm32lg efm32tg top latex
+.PHONY: doc html cm3 usb lm3s lm4f lpc13 lpc17 lpc43 stm32l1 stm32f0 stm32f1 stm32f2 stm32f3 stm32f4 efm32g efm32gg efm32lg efm32tg sam3a sam3n sam3s sam3u sam3x top latex
 
diff --git a/doc/cm3/DoxygenLayout_cm3.xml b/doc/cm3/DoxygenLayout_cm3.xml
index 9311b149..c4219af7 100644
--- a/doc/cm3/DoxygenLayout_cm3.xml
+++ b/doc/cm3/DoxygenLayout_cm3.xml
@@ -20,6 +20,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/efm32g/DoxygenLayout_efm32g.xml b/doc/efm32g/DoxygenLayout_efm32g.xml
index 38d943dc..9ace984b 100644
--- a/doc/efm32g/DoxygenLayout_efm32g.xml
+++ b/doc/efm32g/DoxygenLayout_efm32g.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/efm32gg/DoxygenLayout_efm32gg.xml b/doc/efm32gg/DoxygenLayout_efm32gg.xml
index fa2d2f88..ab7fb34a 100644
--- a/doc/efm32gg/DoxygenLayout_efm32gg.xml
+++ b/doc/efm32gg/DoxygenLayout_efm32gg.xml
@@ -21,6 +21,11 @@
     <tab type="modules" visible="yes" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/efm32lg/DoxygenLayout_efm32lg.xml b/doc/efm32lg/DoxygenLayout_efm32lg.xml
index 15201d98..fd07092e 100644
--- a/doc/efm32lg/DoxygenLayout_efm32lg.xml
+++ b/doc/efm32lg/DoxygenLayout_efm32lg.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="modules" visible="yes" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/efm32tg/DoxygenLayout_efm32tg.xml b/doc/efm32tg/DoxygenLayout_efm32tg.xml
index 5e8d5146..f27b1145 100644
--- a/doc/efm32tg/DoxygenLayout_efm32tg.xml
+++ b/doc/efm32tg/DoxygenLayout_efm32tg.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="modules" visible="yes" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/lm3s/DoxygenLayout_lm3s.xml b/doc/lm3s/DoxygenLayout_lm3s.xml
index 110b3459..73bb6735 100644
--- a/doc/lm3s/DoxygenLayout_lm3s.xml
+++ b/doc/lm3s/DoxygenLayout_lm3s.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/lm4f/DoxygenLayout_lm4f.xml b/doc/lm4f/DoxygenLayout_lm4f.xml
index 814cd4e5..710c4fc1 100644
--- a/doc/lm4f/DoxygenLayout_lm4f.xml
+++ b/doc/lm4f/DoxygenLayout_lm4f.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/lpc13xx/DoxygenLayout_lpc13xx.xml b/doc/lpc13xx/DoxygenLayout_lpc13xx.xml
index b3a044f7..3ca7013d 100644
--- a/doc/lpc13xx/DoxygenLayout_lpc13xx.xml
+++ b/doc/lpc13xx/DoxygenLayout_lpc13xx.xml
@@ -20,6 +20,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/lpc17xx/DoxygenLayout_lpc17xx.xml b/doc/lpc17xx/DoxygenLayout_lpc17xx.xml
index 86195f7b..278d44f0 100644
--- a/doc/lpc17xx/DoxygenLayout_lpc17xx.xml
+++ b/doc/lpc17xx/DoxygenLayout_lpc17xx.xml
@@ -20,6 +20,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/lpc43xx/DoxygenLayout_lpc43xx.xml b/doc/lpc43xx/DoxygenLayout_lpc43xx.xml
index 231efad6..6f6ad5b4 100644
--- a/doc/lpc43xx/DoxygenLayout_lpc43xx.xml
+++ b/doc/lpc43xx/DoxygenLayout_lpc43xx.xml
@@ -20,6 +20,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/sam3a/Doxyfile b/doc/sam3a/Doxyfile
new file mode 100644
index 00000000..4ec920c4
--- /dev/null
+++ b/doc/sam3a/Doxyfile
@@ -0,0 +1,37 @@
+# HTML Documentation for SAM3A code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE            = doxygen_sam3a.log
+
+INPUT                   = ../../include/libopencm3/license.dox \
+                         ../../include/libopencm3/sam/3a \
+                         ../../include/libopencm3/sam/common
+
+INPUT                  += ../../lib/sam/3a \
+                         ../../lib/sam/common
+
+EXCLUDE                 =
+
+EXCLUDE_PATTERNS	= *_common_3n3s.h
+
+LAYOUT_FILE 	        = DoxygenLayout_sam3a.xml
+
+GENERATE_TAGFILE        = sam3a.tag
+
+ENABLE_PREPROCESSING    = YES
+
+
diff --git a/doc/sam3a/Doxyfile_latex b/doc/sam3a/Doxyfile_latex
new file mode 100644
index 00000000..c20eb73c
--- /dev/null
+++ b/doc/sam3a/Doxyfile_latex
@@ -0,0 +1,39 @@
+# LaTeX Documentation for SAM3A code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE 			   = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE           = doxygen_sam3a_latex.log
+
+INPUT                  = ../../include/libopencm3/docmain.dox \
+						 ../../include/libopencm3/license.dox \
+					     ../../include/libopencm3/sam/3a \
+			             ../../include/libopencm3/sam/common
+
+INPUT                 += ../../lib/sam/3a \
+			             ../../lib/sam/common
+
+EXCLUDE                =
+
+EXCLUDE_PATTERNS	= *_common_3n3s.h
+
+LAYOUT_FILE 		   = DoxygenLayout_sam3a.xml
+
+GENERATE_HTML		   = NO
+
+GENERATE_LATEX		   = YES
+
+LATEX_HEADER           = header_sam3a.tex
+
diff --git a/doc/sam3a/DoxygenLayout_sam3a.xml b/doc/sam3a/DoxygenLayout_sam3a.xml
new file mode 100644
index 00000000..d1d425b1
--- /dev/null
+++ b/doc/sam3a/DoxygenLayout_sam3a.xml
@@ -0,0 +1,206 @@
+<doxygenlayout version="1.0">
+  <!-- Navigation index tabs for HTML output -->
+  <navindex>
+    <tab type="mainpage" visible="yes" title="libopencm3"/>
+    <tab type="pages" visible="yes" title="General Information" intro=""/>
+    <tab type="user" visible="yes" url="../../html/index.html" title="Back to Top" intro=""/>
+    <tab type="user" visible="yes" url="../../cm3/html/modules.html" title="CM3 Core" intro=""/>
+    <tab type="user" visible="yes" url="../../usb/html/modules.html" title="Generic USB" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f0/html/modules.html" title="STM32F0" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f1/html/modules.html" title="STM32F1" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f2/html/modules.html" title="STM32F2" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f3/html/modules.html" title="STM32F3" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f4/html/modules.html" title="STM32F4" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32l1/html/modules.html" title="STM32L1" intro=""/>
+    <tab type="user" visible="yes" url="../../lm3s/html/modules.html" title="LM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../lm4f/html/modules.html" title="LM4F" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc13xx/html/modules.html" title="LPC13" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc17xx/html/modules.html" title="LPC17" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc43xx/html/modules.html" title="LPC43" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32g/html/modules.html" title="EFM32 Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="modules" visible="yes" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
+    <tab type="namespaces" visible="yes" title="">
+      <tab type="namespaces" visible="yes" title="" intro=""/>
+      <tab type="namespacemembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="classes" visible="yes" title="">
+      <tab type="classes" visible="yes" title="" intro=""/>
+      <tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
+      <tab type="hierarchy" visible="yes" title="" intro=""/>
+      <tab type="classmembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="files" visible="yes" title="">
+      <tab type="files" visible="yes" title="" intro=""/>
+      <tab type="globals" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="examples" visible="yes" title="" intro=""/>
+  </navindex>
+
+  <!-- Layout definition for a class page -->
+  <class>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <inheritancegraph visible="$CLASS_GRAPH"/>
+    <collaborationgraph visible="$COLLABORATION_GRAPH"/>
+    <allmemberslink visible="yes"/>
+    <memberdecl>
+      <nestedclasses visible="yes" title=""/>
+      <publictypes title=""/>
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+      <publicstaticmethods title=""/>
+      <publicattributes title=""/>
+      <publicstaticattributes title=""/>
+      <protectedtypes title=""/>
+      <protectedslots title=""/>
+      <protectedmethods title=""/>
+      <protectedstaticmethods title=""/>
+      <protectedattributes title=""/>
+      <protectedstaticattributes title=""/>
+      <packagetypes title=""/>
+      <packagemethods title=""/>
+      <packagestaticmethods title=""/>
+      <packageattributes title=""/>
+      <packagestaticattributes title=""/>
+      <properties title=""/>
+      <events title=""/>
+      <privatetypes title=""/>
+      <privateslots title=""/>
+      <privatemethods title=""/>
+      <privatestaticmethods title=""/>
+      <privateattributes title=""/>
+      <privatestaticattributes title=""/>
+      <friends title=""/>
+      <related title="" subtitle=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <constructors title=""/>
+      <functions title=""/>
+      <related title=""/>
+      <variables title=""/>
+      <properties title=""/>
+      <events title=""/>
+    </memberdef>
+    <usedfiles visible="$SHOW_USED_FILES"/>
+    <authorsection visible="yes"/>
+  </class>
+
+  <!-- Layout definition for a namespace page -->
+  <namespace>
+    <briefdescription visible="yes"/>
+    <memberdecl>
+      <nestednamespaces visible="yes" title=""/>
+      <classes visible="yes" title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </namespace>
+
+  <!-- Layout definition for a file page -->
+  <file>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <includegraph visible="$INCLUDE_GRAPH"/>
+    <includedbygraph visible="$INCLUDED_BY_GRAPH"/>
+    <sourcelink visible="yes"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection/>
+  </file>
+
+  <!-- Layout definition for a group page -->
+  <group>
+    <briefdescription visible="yes"/>
+    <groupgraph visible="$GROUP_GRAPHS"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <dirs visible="yes" title=""/>
+      <nestedgroups visible="yes" title=""/>
+      <files visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
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+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <pagedocs/>
+      <inlineclasses title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </group>
+
+  <!-- Layout definition for a directory page -->
+  <directory>
+    <briefdescription visible="yes"/>
+    <directorygraph visible="yes"/>
+    <memberdecl>
+      <dirs visible="yes"/>
+      <files visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+  </directory>
+</doxygenlayout>
diff --git a/doc/sam3a/header_sam3a.tex b/doc/sam3a/header_sam3a.tex
new file mode 100644
index 00000000..89c48881
--- /dev/null
+++ b/doc/sam3a/header_sam3a.tex
@@ -0,0 +1,61 @@
+\documentclass{book}
+\usepackage[a4paper,top=2.5cm,bottom=2.5cm,left=2.5cm,right=2.5cm]{geometry}
+\usepackage{makeidx}
+\usepackage{natbib}
+\usepackage{graphicx}
+\usepackage{multicol}
+\usepackage{float}
+\usepackage{listings}
+\usepackage{color}
+\usepackage{ifthen}
+\usepackage[table]{xcolor}
+\usepackage{textcomp}
+\usepackage{alltt}
+\usepackage{ifpdf}
+\ifpdf
+\usepackage[pdftex,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\else
+\usepackage[ps2pdf,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\usepackage{pspicture}
+\fi
+\usepackage[utf8]{inputenc}
+\usepackage{mathptmx}
+\usepackage[scaled=.90]{helvet}
+\usepackage{courier}
+\usepackage{sectsty}
+\usepackage{amssymb}
+\usepackage[titles]{tocloft}
+\usepackage{doxygen}
+\lstset{language=C++,inputencoding=utf8,basicstyle=\footnotesize,breaklines=true,breakatwhitespace=true,tabsize=4,numbers=left }
+\makeindex
+\setcounter{tocdepth}{3}
+\renewcommand{\footrulewidth}{0.4pt}
+\renewcommand{\familydefault}{\sfdefault}
+\hfuzz=15pt
+\setlength{\emergencystretch}{15pt}
+\hbadness=750
+\tolerance=750
+\begin{document}
+\hypersetup{pageanchor=false,citecolor=blue}
+\begin{titlepage}
+\vspace*{7cm}
+\begin{center}
+{\Huge libopencm3: API Reference\\ Atmel SAM3A ARM Cortex M3 Series}\\
+\vspace*{1cm}
+{\large Generated by Doxygen 1.8.2}\\
+\vspace*{0.5cm}
+{\small Thu Sep 13 2012 23:26:45}\\
+\end{center}
+\end{titlepage}
+\pagenumbering{arabic}
+\hypersetup{pageanchor=true,citecolor=blue}
diff --git a/doc/sam3n/Doxyfile b/doc/sam3n/Doxyfile
new file mode 100644
index 00000000..c268821c
--- /dev/null
+++ b/doc/sam3n/Doxyfile
@@ -0,0 +1,37 @@
+# HTML Documentation for SAM3N code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE            = doxygen_sam3n.log
+
+INPUT                   = ../../include/libopencm3/license.dox \
+                         ../../include/libopencm3/sam/3n \
+                         ../../include/libopencm3/sam/common
+
+INPUT                  += ../../lib/sam/3n \
+                         ../../lib/sam/common
+
+EXCLUDE                 =
+
+EXCLUDE_PATTERNS	= *_common_3a3u3x.h
+
+LAYOUT_FILE 	        = DoxygenLayout_sam3n.xml
+
+GENERATE_TAGFILE        = sam3n.tag
+
+ENABLE_PREPROCESSING    = YES
+
+
diff --git a/doc/sam3n/Doxyfile_latex b/doc/sam3n/Doxyfile_latex
new file mode 100644
index 00000000..9583bc56
--- /dev/null
+++ b/doc/sam3n/Doxyfile_latex
@@ -0,0 +1,39 @@
+# LaTeX Documentation for SAM3N code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE 			   = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE           = doxygen_sam3n_latex.log
+
+INPUT                  = ../../include/libopencm3/docmain.dox \
+						 ../../include/libopencm3/license.dox \
+					     ../../include/libopencm3/sam/3n \
+			             ../../include/libopencm3/sam/common
+
+INPUT                 += ../../lib/sam/3n \
+			             ../../lib/sam/common
+
+EXCLUDE                =
+
+EXCLUDE_PATTERNS	   = *_common_3a3u3x.h
+
+LAYOUT_FILE 		   = DoxygenLayout_sam3n.xml
+
+GENERATE_HTML		   = NO
+
+GENERATE_LATEX		   = YES
+
+LATEX_HEADER           = header_sam3n.tex
+
diff --git a/doc/sam3n/DoxygenLayout_sam3n.xml b/doc/sam3n/DoxygenLayout_sam3n.xml
new file mode 100644
index 00000000..d7a17b8e
--- /dev/null
+++ b/doc/sam3n/DoxygenLayout_sam3n.xml
@@ -0,0 +1,206 @@
+<doxygenlayout version="1.0">
+  <!-- Navigation index tabs for HTML output -->
+  <navindex>
+    <tab type="mainpage" visible="yes" title="libopencm3"/>
+    <tab type="pages" visible="yes" title="General Information" intro=""/>
+    <tab type="user" visible="yes" url="../../html/index.html" title="Back to Top" intro=""/>
+    <tab type="user" visible="yes" url="../../cm3/html/modules.html" title="CM3 Core" intro=""/>
+    <tab type="user" visible="yes" url="../../usb/html/modules.html" title="Generic USB" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f0/html/modules.html" title="STM32F0" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f1/html/modules.html" title="STM32F1" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f2/html/modules.html" title="STM32F2" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f3/html/modules.html" title="STM32F3" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f4/html/modules.html" title="STM32F4" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32l1/html/modules.html" title="STM32L1" intro=""/>
+    <tab type="user" visible="yes" url="../../lm3s/html/modules.html" title="LM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../lm4f/html/modules.html" title="LM4F" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc13xx/html/modules.html" title="LPC13" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc17xx/html/modules.html" title="LPC17" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc43xx/html/modules.html" title="LPC43" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32g/html/modules.html" title="EFM32 Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="modules" visible="yes" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
+    <tab type="namespaces" visible="yes" title="">
+      <tab type="namespaces" visible="yes" title="" intro=""/>
+      <tab type="namespacemembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="classes" visible="yes" title="">
+      <tab type="classes" visible="yes" title="" intro=""/>
+      <tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
+      <tab type="hierarchy" visible="yes" title="" intro=""/>
+      <tab type="classmembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="files" visible="yes" title="">
+      <tab type="files" visible="yes" title="" intro=""/>
+      <tab type="globals" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="examples" visible="yes" title="" intro=""/>
+  </navindex>
+
+  <!-- Layout definition for a class page -->
+  <class>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <inheritancegraph visible="$CLASS_GRAPH"/>
+    <collaborationgraph visible="$COLLABORATION_GRAPH"/>
+    <allmemberslink visible="yes"/>
+    <memberdecl>
+      <nestedclasses visible="yes" title=""/>
+      <publictypes title=""/>
+      <publicslots title=""/>
+      <signals title=""/>
+      <publicmethods title=""/>
+      <publicstaticmethods title=""/>
+      <publicattributes title=""/>
+      <publicstaticattributes title=""/>
+      <protectedtypes title=""/>
+      <protectedslots title=""/>
+      <protectedmethods title=""/>
+      <protectedstaticmethods title=""/>
+      <protectedattributes title=""/>
+      <protectedstaticattributes title=""/>
+      <packagetypes title=""/>
+      <packagemethods title=""/>
+      <packagestaticmethods title=""/>
+      <packageattributes title=""/>
+      <packagestaticattributes title=""/>
+      <properties title=""/>
+      <events title=""/>
+      <privatetypes title=""/>
+      <privateslots title=""/>
+      <privatemethods title=""/>
+      <privatestaticmethods title=""/>
+      <privateattributes title=""/>
+      <privatestaticattributes title=""/>
+      <friends title=""/>
+      <related title="" subtitle=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <constructors title=""/>
+      <functions title=""/>
+      <related title=""/>
+      <variables title=""/>
+      <properties title=""/>
+      <events title=""/>
+    </memberdef>
+    <usedfiles visible="$SHOW_USED_FILES"/>
+    <authorsection visible="yes"/>
+  </class>
+
+  <!-- Layout definition for a namespace page -->
+  <namespace>
+    <briefdescription visible="yes"/>
+    <memberdecl>
+      <nestednamespaces visible="yes" title=""/>
+      <classes visible="yes" title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </namespace>
+
+  <!-- Layout definition for a file page -->
+  <file>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <includegraph visible="$INCLUDE_GRAPH"/>
+    <includedbygraph visible="$INCLUDED_BY_GRAPH"/>
+    <sourcelink visible="yes"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection/>
+  </file>
+
+  <!-- Layout definition for a group page -->
+  <group>
+    <briefdescription visible="yes"/>
+    <groupgraph visible="$GROUP_GRAPHS"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <dirs visible="yes" title=""/>
+      <nestedgroups visible="yes" title=""/>
+      <files visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <pagedocs/>
+      <inlineclasses title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </group>
+
+  <!-- Layout definition for a directory page -->
+  <directory>
+    <briefdescription visible="yes"/>
+    <directorygraph visible="yes"/>
+    <memberdecl>
+      <dirs visible="yes"/>
+      <files visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+  </directory>
+</doxygenlayout>
diff --git a/doc/sam3n/header_sam3a.tex b/doc/sam3n/header_sam3a.tex
new file mode 100644
index 00000000..987ced71
--- /dev/null
+++ b/doc/sam3n/header_sam3a.tex
@@ -0,0 +1,61 @@
+\documentclass{book}
+\usepackage[a4paper,top=2.5cm,bottom=2.5cm,left=2.5cm,right=2.5cm]{geometry}
+\usepackage{makeidx}
+\usepackage{natbib}
+\usepackage{graphicx}
+\usepackage{multicol}
+\usepackage{float}
+\usepackage{listings}
+\usepackage{color}
+\usepackage{ifthen}
+\usepackage[table]{xcolor}
+\usepackage{textcomp}
+\usepackage{alltt}
+\usepackage{ifpdf}
+\ifpdf
+\usepackage[pdftex,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\else
+\usepackage[ps2pdf,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\usepackage{pspicture}
+\fi
+\usepackage[utf8]{inputenc}
+\usepackage{mathptmx}
+\usepackage[scaled=.90]{helvet}
+\usepackage{courier}
+\usepackage{sectsty}
+\usepackage{amssymb}
+\usepackage[titles]{tocloft}
+\usepackage{doxygen}
+\lstset{language=C++,inputencoding=utf8,basicstyle=\footnotesize,breaklines=true,breakatwhitespace=true,tabsize=4,numbers=left }
+\makeindex
+\setcounter{tocdepth}{3}
+\renewcommand{\footrulewidth}{0.4pt}
+\renewcommand{\familydefault}{\sfdefault}
+\hfuzz=15pt
+\setlength{\emergencystretch}{15pt}
+\hbadness=750
+\tolerance=750
+\begin{document}
+\hypersetup{pageanchor=false,citecolor=blue}
+\begin{titlepage}
+\vspace*{7cm}
+\begin{center}
+{\Huge libopencm3: API Reference\\ Atmel SAM3N ARM Cortex M3 Series}\\
+\vspace*{1cm}
+{\large Generated by Doxygen 1.8.2}\\
+\vspace*{0.5cm}
+{\small Thu Sep 13 2012 23:26:45}\\
+\end{center}
+\end{titlepage}
+\pagenumbering{arabic}
+\hypersetup{pageanchor=true,citecolor=blue}
diff --git a/doc/sam3s/Doxyfile b/doc/sam3s/Doxyfile
new file mode 100644
index 00000000..2c6a2ebb
--- /dev/null
+++ b/doc/sam3s/Doxyfile
@@ -0,0 +1,37 @@
+# HTML Documentation for SAM3S code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE            = doxygen_sam3s.log
+
+INPUT                   = ../../include/libopencm3/license.dox \
+                         ../../include/libopencm3/sam/3s \
+                         ../../include/libopencm3/sam/common
+
+INPUT                  += ../../lib/sam/3a \
+                         ../../lib/sam/common
+
+EXCLUDE                 =
+
+EXCLUDE_PATTERNS	= *_common_3a3u3x.h
+
+LAYOUT_FILE 	        = DoxygenLayout_sam3s.xml
+
+GENERATE_TAGFILE        = sam3s.tag
+
+ENABLE_PREPROCESSING    = YES
+
+
diff --git a/doc/sam3s/Doxyfile_latex b/doc/sam3s/Doxyfile_latex
new file mode 100644
index 00000000..648f7a8f
--- /dev/null
+++ b/doc/sam3s/Doxyfile_latex
@@ -0,0 +1,39 @@
+# LaTeX Documentation for SAM3S code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE 			   = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE           = doxygen_sam3s_latex.log
+
+INPUT                  = ../../include/libopencm3/docmain.dox \
+						 ../../include/libopencm3/license.dox \
+					     ../../include/libopencm3/sam/3s \
+			             ../../include/libopencm3/sam/common
+
+INPUT                 += ../../lib/sam/3s \
+			             ../../lib/sam/common
+
+EXCLUDE                =
+
+EXCLUDE_PATTERNS	   = *_common_3a3u3x.h
+
+LAYOUT_FILE 		   = DoxygenLayout_sam3s.xml
+
+GENERATE_HTML		   = NO
+
+GENERATE_LATEX		   = YES
+
+LATEX_HEADER           = header_sam3s.tex
+
diff --git a/doc/sam3s/DoxygenLayout_sam3s.xml b/doc/sam3s/DoxygenLayout_sam3s.xml
new file mode 100644
index 00000000..83e4a36b
--- /dev/null
+++ b/doc/sam3s/DoxygenLayout_sam3s.xml
@@ -0,0 +1,206 @@
+<doxygenlayout version="1.0">
+  <!-- Navigation index tabs for HTML output -->
+  <navindex>
+    <tab type="mainpage" visible="yes" title="libopencm3"/>
+    <tab type="pages" visible="yes" title="General Information" intro=""/>
+    <tab type="user" visible="yes" url="../../html/index.html" title="Back to Top" intro=""/>
+    <tab type="user" visible="yes" url="../../cm3/html/modules.html" title="CM3 Core" intro=""/>
+    <tab type="user" visible="yes" url="../../usb/html/modules.html" title="Generic USB" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f0/html/modules.html" title="STM32F0" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f1/html/modules.html" title="STM32F1" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f2/html/modules.html" title="STM32F2" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f3/html/modules.html" title="STM32F3" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f4/html/modules.html" title="STM32F4" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32l1/html/modules.html" title="STM32L1" intro=""/>
+    <tab type="user" visible="yes" url="../../lm3s/html/modules.html" title="LM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../lm4f/html/modules.html" title="LM4F" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc13xx/html/modules.html" title="LPC13" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc17xx/html/modules.html" title="LPC17" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc43xx/html/modules.html" title="LPC43" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32g/html/modules.html" title="EFM32 Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="modules" visible="yes" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
+    <tab type="namespaces" visible="yes" title="">
+      <tab type="namespaces" visible="yes" title="" intro=""/>
+      <tab type="namespacemembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="classes" visible="yes" title="">
+      <tab type="classes" visible="yes" title="" intro=""/>
+      <tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
+      <tab type="hierarchy" visible="yes" title="" intro=""/>
+      <tab type="classmembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="files" visible="yes" title="">
+      <tab type="files" visible="yes" title="" intro=""/>
+      <tab type="globals" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="examples" visible="yes" title="" intro=""/>
+  </navindex>
+
+  <!-- Layout definition for a class page -->
+  <class>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <inheritancegraph visible="$CLASS_GRAPH"/>
+    <collaborationgraph visible="$COLLABORATION_GRAPH"/>
+    <allmemberslink visible="yes"/>
+    <memberdecl>
+      <nestedclasses visible="yes" title=""/>
+      <publictypes title=""/>
+      <publicslots title=""/>
+      <signals title=""/>
+      <publicmethods title=""/>
+      <publicstaticmethods title=""/>
+      <publicattributes title=""/>
+      <publicstaticattributes title=""/>
+      <protectedtypes title=""/>
+      <protectedslots title=""/>
+      <protectedmethods title=""/>
+      <protectedstaticmethods title=""/>
+      <protectedattributes title=""/>
+      <protectedstaticattributes title=""/>
+      <packagetypes title=""/>
+      <packagemethods title=""/>
+      <packagestaticmethods title=""/>
+      <packageattributes title=""/>
+      <packagestaticattributes title=""/>
+      <properties title=""/>
+      <events title=""/>
+      <privatetypes title=""/>
+      <privateslots title=""/>
+      <privatemethods title=""/>
+      <privatestaticmethods title=""/>
+      <privateattributes title=""/>
+      <privatestaticattributes title=""/>
+      <friends title=""/>
+      <related title="" subtitle=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <constructors title=""/>
+      <functions title=""/>
+      <related title=""/>
+      <variables title=""/>
+      <properties title=""/>
+      <events title=""/>
+    </memberdef>
+    <usedfiles visible="$SHOW_USED_FILES"/>
+    <authorsection visible="yes"/>
+  </class>
+
+  <!-- Layout definition for a namespace page -->
+  <namespace>
+    <briefdescription visible="yes"/>
+    <memberdecl>
+      <nestednamespaces visible="yes" title=""/>
+      <classes visible="yes" title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </namespace>
+
+  <!-- Layout definition for a file page -->
+  <file>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <includegraph visible="$INCLUDE_GRAPH"/>
+    <includedbygraph visible="$INCLUDED_BY_GRAPH"/>
+    <sourcelink visible="yes"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection/>
+  </file>
+
+  <!-- Layout definition for a group page -->
+  <group>
+    <briefdescription visible="yes"/>
+    <groupgraph visible="$GROUP_GRAPHS"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <dirs visible="yes" title=""/>
+      <nestedgroups visible="yes" title=""/>
+      <files visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
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+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <pagedocs/>
+      <inlineclasses title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </group>
+
+  <!-- Layout definition for a directory page -->
+  <directory>
+    <briefdescription visible="yes"/>
+    <directorygraph visible="yes"/>
+    <memberdecl>
+      <dirs visible="yes"/>
+      <files visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+  </directory>
+</doxygenlayout>
diff --git a/doc/sam3s/header_sam3a.tex b/doc/sam3s/header_sam3a.tex
new file mode 100644
index 00000000..61e24c13
--- /dev/null
+++ b/doc/sam3s/header_sam3a.tex
@@ -0,0 +1,61 @@
+\documentclass{book}
+\usepackage[a4paper,top=2.5cm,bottom=2.5cm,left=2.5cm,right=2.5cm]{geometry}
+\usepackage{makeidx}
+\usepackage{natbib}
+\usepackage{graphicx}
+\usepackage{multicol}
+\usepackage{float}
+\usepackage{listings}
+\usepackage{color}
+\usepackage{ifthen}
+\usepackage[table]{xcolor}
+\usepackage{textcomp}
+\usepackage{alltt}
+\usepackage{ifpdf}
+\ifpdf
+\usepackage[pdftex,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\else
+\usepackage[ps2pdf,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\usepackage{pspicture}
+\fi
+\usepackage[utf8]{inputenc}
+\usepackage{mathptmx}
+\usepackage[scaled=.90]{helvet}
+\usepackage{courier}
+\usepackage{sectsty}
+\usepackage{amssymb}
+\usepackage[titles]{tocloft}
+\usepackage{doxygen}
+\lstset{language=C++,inputencoding=utf8,basicstyle=\footnotesize,breaklines=true,breakatwhitespace=true,tabsize=4,numbers=left }
+\makeindex
+\setcounter{tocdepth}{3}
+\renewcommand{\footrulewidth}{0.4pt}
+\renewcommand{\familydefault}{\sfdefault}
+\hfuzz=15pt
+\setlength{\emergencystretch}{15pt}
+\hbadness=750
+\tolerance=750
+\begin{document}
+\hypersetup{pageanchor=false,citecolor=blue}
+\begin{titlepage}
+\vspace*{7cm}
+\begin{center}
+{\Huge libopencm3: API Reference\\ Atmel SAM3S ARM Cortex M3 Series}\\
+\vspace*{1cm}
+{\large Generated by Doxygen 1.8.2}\\
+\vspace*{0.5cm}
+{\small Thu Sep 13 2012 23:26:45}\\
+\end{center}
+\end{titlepage}
+\pagenumbering{arabic}
+\hypersetup{pageanchor=true,citecolor=blue}
diff --git a/doc/sam3u/Doxyfile b/doc/sam3u/Doxyfile
new file mode 100644
index 00000000..72fddf45
--- /dev/null
+++ b/doc/sam3u/Doxyfile
@@ -0,0 +1,37 @@
+# HTML Documentation for SAM3U code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE            = doxygen_sam3u.log
+
+INPUT                   = ../../include/libopencm3/license.dox \
+                         ../../include/libopencm3/sam/3u \
+                         ../../include/libopencm3/sam/common
+
+INPUT                  += ../../lib/sam/3u \
+                         ../../lib/sam/common
+
+EXCLUDE                 =
+
+EXCLUDE_PATTERNS	= *_common_3n3s.h
+
+LAYOUT_FILE 	        = DoxygenLayout_sam3u.xml
+
+GENERATE_TAGFILE        = sam3u.tag
+
+ENABLE_PREPROCESSING    = YES
+
+
diff --git a/doc/sam3u/Doxyfile_latex b/doc/sam3u/Doxyfile_latex
new file mode 100644
index 00000000..d732d6eb
--- /dev/null
+++ b/doc/sam3u/Doxyfile_latex
@@ -0,0 +1,39 @@
+# LaTeX Documentation for SAM3U code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE 			   = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE           = doxygen_sam3u_latex.log
+
+INPUT                  = ../../include/libopencm3/docmain.dox \
+						 ../../include/libopencm3/license.dox \
+					     ../../include/libopencm3/sam/3u \
+			             ../../include/libopencm3/sam/common
+
+INPUT                 += ../../lib/sam/3u \
+			             ../../lib/sam/common
+
+EXCLUDE                =
+
+EXCLUDE_PATTERNS	   = *_common_3n3s.h
+
+LAYOUT_FILE 		   = DoxygenLayout_sam3u.xml
+
+GENERATE_HTML		   = NO
+
+GENERATE_LATEX		   = YES
+
+LATEX_HEADER           = header_sam3u.tex
+
diff --git a/doc/sam3u/DoxygenLayout_sam3u.xml b/doc/sam3u/DoxygenLayout_sam3u.xml
new file mode 100644
index 00000000..f39f0de1
--- /dev/null
+++ b/doc/sam3u/DoxygenLayout_sam3u.xml
@@ -0,0 +1,206 @@
+<doxygenlayout version="1.0">
+  <!-- Navigation index tabs for HTML output -->
+  <navindex>
+    <tab type="mainpage" visible="yes" title="libopencm3"/>
+    <tab type="pages" visible="yes" title="General Information" intro=""/>
+    <tab type="user" visible="yes" url="../../html/index.html" title="Back to Top" intro=""/>
+    <tab type="user" visible="yes" url="../../cm3/html/modules.html" title="CM3 Core" intro=""/>
+    <tab type="user" visible="yes" url="../../usb/html/modules.html" title="Generic USB" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f0/html/modules.html" title="STM32F0" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f1/html/modules.html" title="STM32F1" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f2/html/modules.html" title="STM32F2" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f3/html/modules.html" title="STM32F3" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f4/html/modules.html" title="STM32F4" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32l1/html/modules.html" title="STM32L1" intro=""/>
+    <tab type="user" visible="yes" url="../../lm3s/html/modules.html" title="LM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../lm4f/html/modules.html" title="LM4F" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc13xx/html/modules.html" title="LPC13" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc17xx/html/modules.html" title="LPC17" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc43xx/html/modules.html" title="LPC43" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32g/html/modules.html" title="EFM32 Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="modules" visible="yes" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
+    <tab type="namespaces" visible="yes" title="">
+      <tab type="namespaces" visible="yes" title="" intro=""/>
+      <tab type="namespacemembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="classes" visible="yes" title="">
+      <tab type="classes" visible="yes" title="" intro=""/>
+      <tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
+      <tab type="hierarchy" visible="yes" title="" intro=""/>
+      <tab type="classmembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="files" visible="yes" title="">
+      <tab type="files" visible="yes" title="" intro=""/>
+      <tab type="globals" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="examples" visible="yes" title="" intro=""/>
+  </navindex>
+
+  <!-- Layout definition for a class page -->
+  <class>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <inheritancegraph visible="$CLASS_GRAPH"/>
+    <collaborationgraph visible="$COLLABORATION_GRAPH"/>
+    <allmemberslink visible="yes"/>
+    <memberdecl>
+      <nestedclasses visible="yes" title=""/>
+      <publictypes title=""/>
+      <publicslots title=""/>
+      <signals title=""/>
+      <publicmethods title=""/>
+      <publicstaticmethods title=""/>
+      <publicattributes title=""/>
+      <publicstaticattributes title=""/>
+      <protectedtypes title=""/>
+      <protectedslots title=""/>
+      <protectedmethods title=""/>
+      <protectedstaticmethods title=""/>
+      <protectedattributes title=""/>
+      <protectedstaticattributes title=""/>
+      <packagetypes title=""/>
+      <packagemethods title=""/>
+      <packagestaticmethods title=""/>
+      <packageattributes title=""/>
+      <packagestaticattributes title=""/>
+      <properties title=""/>
+      <events title=""/>
+      <privatetypes title=""/>
+      <privateslots title=""/>
+      <privatemethods title=""/>
+      <privatestaticmethods title=""/>
+      <privateattributes title=""/>
+      <privatestaticattributes title=""/>
+      <friends title=""/>
+      <related title="" subtitle=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <constructors title=""/>
+      <functions title=""/>
+      <related title=""/>
+      <variables title=""/>
+      <properties title=""/>
+      <events title=""/>
+    </memberdef>
+    <usedfiles visible="$SHOW_USED_FILES"/>
+    <authorsection visible="yes"/>
+  </class>
+
+  <!-- Layout definition for a namespace page -->
+  <namespace>
+    <briefdescription visible="yes"/>
+    <memberdecl>
+      <nestednamespaces visible="yes" title=""/>
+      <classes visible="yes" title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </namespace>
+
+  <!-- Layout definition for a file page -->
+  <file>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <includegraph visible="$INCLUDE_GRAPH"/>
+    <includedbygraph visible="$INCLUDED_BY_GRAPH"/>
+    <sourcelink visible="yes"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection/>
+  </file>
+
+  <!-- Layout definition for a group page -->
+  <group>
+    <briefdescription visible="yes"/>
+    <groupgraph visible="$GROUP_GRAPHS"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <dirs visible="yes" title=""/>
+      <nestedgroups visible="yes" title=""/>
+      <files visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <pagedocs/>
+      <inlineclasses title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </group>
+
+  <!-- Layout definition for a directory page -->
+  <directory>
+    <briefdescription visible="yes"/>
+    <directorygraph visible="yes"/>
+    <memberdecl>
+      <dirs visible="yes"/>
+      <files visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+  </directory>
+</doxygenlayout>
diff --git a/doc/sam3u/header_sam3a.tex b/doc/sam3u/header_sam3a.tex
new file mode 100644
index 00000000..79668b1b
--- /dev/null
+++ b/doc/sam3u/header_sam3a.tex
@@ -0,0 +1,61 @@
+\documentclass{book}
+\usepackage[a4paper,top=2.5cm,bottom=2.5cm,left=2.5cm,right=2.5cm]{geometry}
+\usepackage{makeidx}
+\usepackage{natbib}
+\usepackage{graphicx}
+\usepackage{multicol}
+\usepackage{float}
+\usepackage{listings}
+\usepackage{color}
+\usepackage{ifthen}
+\usepackage[table]{xcolor}
+\usepackage{textcomp}
+\usepackage{alltt}
+\usepackage{ifpdf}
+\ifpdf
+\usepackage[pdftex,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\else
+\usepackage[ps2pdf,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\usepackage{pspicture}
+\fi
+\usepackage[utf8]{inputenc}
+\usepackage{mathptmx}
+\usepackage[scaled=.90]{helvet}
+\usepackage{courier}
+\usepackage{sectsty}
+\usepackage{amssymb}
+\usepackage[titles]{tocloft}
+\usepackage{doxygen}
+\lstset{language=C++,inputencoding=utf8,basicstyle=\footnotesize,breaklines=true,breakatwhitespace=true,tabsize=4,numbers=left }
+\makeindex
+\setcounter{tocdepth}{3}
+\renewcommand{\footrulewidth}{0.4pt}
+\renewcommand{\familydefault}{\sfdefault}
+\hfuzz=15pt
+\setlength{\emergencystretch}{15pt}
+\hbadness=750
+\tolerance=750
+\begin{document}
+\hypersetup{pageanchor=false,citecolor=blue}
+\begin{titlepage}
+\vspace*{7cm}
+\begin{center}
+{\Huge libopencm3: API Reference\\ Atmel SAM3U ARM Cortex M3 Series}\\
+\vspace*{1cm}
+{\large Generated by Doxygen 1.8.2}\\
+\vspace*{0.5cm}
+{\small Thu Sep 13 2012 23:26:45}\\
+\end{center}
+\end{titlepage}
+\pagenumbering{arabic}
+\hypersetup{pageanchor=true,citecolor=blue}
diff --git a/doc/sam3x/Doxyfile b/doc/sam3x/Doxyfile
new file mode 100644
index 00000000..ce5e62a7
--- /dev/null
+++ b/doc/sam3x/Doxyfile
@@ -0,0 +1,37 @@
+# HTML Documentation for SAM3X code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE            = doxygen_sam3x.log
+
+INPUT                   = ../../include/libopencm3/license.dox \
+                         ../../include/libopencm3/sam/3x \
+                         ../../include/libopencm3/sam/common
+
+INPUT                  += ../../lib/sam/3x \
+                         ../../lib/sam/common
+
+EXCLUDE                 =
+
+EXCLUDE_PATTERNS	= *_common_3n3s.h
+
+LAYOUT_FILE 	        = DoxygenLayout_sam3x.xml
+
+GENERATE_TAGFILE        = sam3x.tag
+
+ENABLE_PREPROCESSING    = YES
+
+
diff --git a/doc/sam3x/Doxyfile_latex b/doc/sam3x/Doxyfile_latex
new file mode 100644
index 00000000..11e0105b
--- /dev/null
+++ b/doc/sam3x/Doxyfile_latex
@@ -0,0 +1,39 @@
+# LaTeX Documentation for SAM3X code level
+
+# 14 September 2012
+# (C) Ken Sarkies <ksarkies@internode.on.net>
+# 09 February 2014
+# (C) Felix Held <felix-libopencm3@felixheld.de>
+
+#---------------------------------------------------------------------------
+# Common Include File
+#---------------------------------------------------------------------------
+
+@INCLUDE 			   = ../Doxyfile_common
+
+#---------------------------------------------------------------------------
+# Local settings
+#---------------------------------------------------------------------------
+
+WARN_LOGFILE           = doxygen_sam3x_latex.log
+
+INPUT                  = ../../include/libopencm3/docmain.dox \
+						 ../../include/libopencm3/license.dox \
+					     ../../include/libopencm3/sam/3x \
+			             ../../include/libopencm3/sam/common
+
+INPUT                 += ../../lib/sam/3x \
+			             ../../lib/sam/common
+
+EXCLUDE                =
+
+EXCLUDE_PATTERNS	   = *_common_3n3s.h
+
+LAYOUT_FILE 		   = DoxygenLayout_sam3x.xml
+
+GENERATE_HTML		   = NO
+
+GENERATE_LATEX		   = YES
+
+LATEX_HEADER           = header_sam3x.tex
+
diff --git a/doc/sam3x/DoxygenLayout_sam3x.xml b/doc/sam3x/DoxygenLayout_sam3x.xml
new file mode 100644
index 00000000..717d3c10
--- /dev/null
+++ b/doc/sam3x/DoxygenLayout_sam3x.xml
@@ -0,0 +1,206 @@
+<doxygenlayout version="1.0">
+  <!-- Navigation index tabs for HTML output -->
+  <navindex>
+    <tab type="mainpage" visible="yes" title="libopencm3"/>
+    <tab type="pages" visible="yes" title="General Information" intro=""/>
+    <tab type="user" visible="yes" url="../../html/index.html" title="Back to Top" intro=""/>
+    <tab type="user" visible="yes" url="../../cm3/html/modules.html" title="CM3 Core" intro=""/>
+    <tab type="user" visible="yes" url="../../usb/html/modules.html" title="Generic USB" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f0/html/modules.html" title="STM32F0" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f1/html/modules.html" title="STM32F1" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f2/html/modules.html" title="STM32F2" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f3/html/modules.html" title="STM32F3" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32f4/html/modules.html" title="STM32F4" intro=""/>
+    <tab type="user" visible="yes" url="../../stm32l1/html/modules.html" title="STM32L1" intro=""/>
+    <tab type="user" visible="yes" url="../../lm3s/html/modules.html" title="LM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../lm4f/html/modules.html" title="LM4F" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc13xx/html/modules.html" title="LPC13" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc17xx/html/modules.html" title="LPC17" intro=""/>
+    <tab type="user" visible="yes" url="../../lpc43xx/html/modules.html" title="LPC43" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32g/html/modules.html" title="EFM32 Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="modules" visible="yes" title="SAM3X" intro=""/>
+    <tab type="namespaces" visible="yes" title="">
+      <tab type="namespaces" visible="yes" title="" intro=""/>
+      <tab type="namespacemembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="classes" visible="yes" title="">
+      <tab type="classes" visible="yes" title="" intro=""/>
+      <tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
+      <tab type="hierarchy" visible="yes" title="" intro=""/>
+      <tab type="classmembers" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="files" visible="yes" title="">
+      <tab type="files" visible="yes" title="" intro=""/>
+      <tab type="globals" visible="yes" title="" intro=""/>
+    </tab>
+    <tab type="examples" visible="yes" title="" intro=""/>
+  </navindex>
+
+  <!-- Layout definition for a class page -->
+  <class>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <inheritancegraph visible="$CLASS_GRAPH"/>
+    <collaborationgraph visible="$COLLABORATION_GRAPH"/>
+    <allmemberslink visible="yes"/>
+    <memberdecl>
+      <nestedclasses visible="yes" title=""/>
+      <publictypes title=""/>
+      <publicslots title=""/>
+      <signals title=""/>
+      <publicmethods title=""/>
+      <publicstaticmethods title=""/>
+      <publicattributes title=""/>
+      <publicstaticattributes title=""/>
+      <protectedtypes title=""/>
+      <protectedslots title=""/>
+      <protectedmethods title=""/>
+      <protectedstaticmethods title=""/>
+      <protectedattributes title=""/>
+      <protectedstaticattributes title=""/>
+      <packagetypes title=""/>
+      <packagemethods title=""/>
+      <packagestaticmethods title=""/>
+      <packageattributes title=""/>
+      <packagestaticattributes title=""/>
+      <properties title=""/>
+      <events title=""/>
+      <privatetypes title=""/>
+      <privateslots title=""/>
+      <privatemethods title=""/>
+      <privatestaticmethods title=""/>
+      <privateattributes title=""/>
+      <privatestaticattributes title=""/>
+      <friends title=""/>
+      <related title="" subtitle=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <constructors title=""/>
+      <functions title=""/>
+      <related title=""/>
+      <variables title=""/>
+      <properties title=""/>
+      <events title=""/>
+    </memberdef>
+    <usedfiles visible="$SHOW_USED_FILES"/>
+    <authorsection visible="yes"/>
+  </class>
+
+  <!-- Layout definition for a namespace page -->
+  <namespace>
+    <briefdescription visible="yes"/>
+    <memberdecl>
+      <nestednamespaces visible="yes" title=""/>
+      <classes visible="yes" title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </namespace>
+
+  <!-- Layout definition for a file page -->
+  <file>
+    <briefdescription visible="yes"/>
+    <includes visible="$SHOW_INCLUDE_FILES"/>
+    <includegraph visible="$INCLUDE_GRAPH"/>
+    <includedbygraph visible="$INCLUDED_BY_GRAPH"/>
+    <sourcelink visible="yes"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <functions title=""/>
+      <variables title=""/>
+    </memberdef>
+    <authorsection/>
+  </file>
+
+  <!-- Layout definition for a group page -->
+  <group>
+    <briefdescription visible="yes"/>
+    <groupgraph visible="$GROUP_GRAPHS"/>
+    <memberdecl>
+      <classes visible="yes" title=""/>
+      <namespaces visible="yes" title=""/>
+      <dirs visible="yes" title=""/>
+      <nestedgroups visible="yes" title=""/>
+      <files visible="yes" title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+      <membergroups visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+    <memberdef>
+      <pagedocs/>
+      <inlineclasses title=""/>
+      <defines title=""/>
+      <typedefs title=""/>
+      <enums title=""/>
+      <enumvalues title=""/>
+      <functions title=""/>
+      <variables title=""/>
+      <signals title=""/>
+      <publicslots title=""/>
+      <protectedslots title=""/>
+      <privateslots title=""/>
+      <events title=""/>
+      <properties title=""/>
+      <friends title=""/>
+    </memberdef>
+    <authorsection visible="yes"/>
+  </group>
+
+  <!-- Layout definition for a directory page -->
+  <directory>
+    <briefdescription visible="yes"/>
+    <directorygraph visible="yes"/>
+    <memberdecl>
+      <dirs visible="yes"/>
+      <files visible="yes"/>
+    </memberdecl>
+    <detaileddescription title=""/>
+  </directory>
+</doxygenlayout>
diff --git a/doc/sam3x/header_sam3a.tex b/doc/sam3x/header_sam3a.tex
new file mode 100644
index 00000000..b3c7e4ec
--- /dev/null
+++ b/doc/sam3x/header_sam3a.tex
@@ -0,0 +1,61 @@
+\documentclass{book}
+\usepackage[a4paper,top=2.5cm,bottom=2.5cm,left=2.5cm,right=2.5cm]{geometry}
+\usepackage{makeidx}
+\usepackage{natbib}
+\usepackage{graphicx}
+\usepackage{multicol}
+\usepackage{float}
+\usepackage{listings}
+\usepackage{color}
+\usepackage{ifthen}
+\usepackage[table]{xcolor}
+\usepackage{textcomp}
+\usepackage{alltt}
+\usepackage{ifpdf}
+\ifpdf
+\usepackage[pdftex,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\else
+\usepackage[ps2pdf,
+            pagebackref=true,
+            colorlinks=true,
+            linkcolor=blue,
+            unicode
+           ]{hyperref}
+\usepackage{pspicture}
+\fi
+\usepackage[utf8]{inputenc}
+\usepackage{mathptmx}
+\usepackage[scaled=.90]{helvet}
+\usepackage{courier}
+\usepackage{sectsty}
+\usepackage{amssymb}
+\usepackage[titles]{tocloft}
+\usepackage{doxygen}
+\lstset{language=C++,inputencoding=utf8,basicstyle=\footnotesize,breaklines=true,breakatwhitespace=true,tabsize=4,numbers=left }
+\makeindex
+\setcounter{tocdepth}{3}
+\renewcommand{\footrulewidth}{0.4pt}
+\renewcommand{\familydefault}{\sfdefault}
+\hfuzz=15pt
+\setlength{\emergencystretch}{15pt}
+\hbadness=750
+\tolerance=750
+\begin{document}
+\hypersetup{pageanchor=false,citecolor=blue}
+\begin{titlepage}
+\vspace*{7cm}
+\begin{center}
+{\Huge libopencm3: API Reference\\ Atmel SAM3X ARM Cortex M3 Series}\\
+\vspace*{1cm}
+{\large Generated by Doxygen 1.8.2}\\
+\vspace*{0.5cm}
+{\small Thu Sep 13 2012 23:26:45}\\
+\end{center}
+\end{titlepage}
+\pagenumbering{arabic}
+\hypersetup{pageanchor=true,citecolor=blue}
diff --git a/doc/stm32f0/DoxygenLayout_stm32f0.xml b/doc/stm32f0/DoxygenLayout_stm32f0.xml
index f614de0a..07b09bcc 100644
--- a/doc/stm32f0/DoxygenLayout_stm32f0.xml
+++ b/doc/stm32f0/DoxygenLayout_stm32f0.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/stm32f1/DoxygenLayout_stm32f1.xml b/doc/stm32f1/DoxygenLayout_stm32f1.xml
index 12788889..9d5fea71 100644
--- a/doc/stm32f1/DoxygenLayout_stm32f1.xml
+++ b/doc/stm32f1/DoxygenLayout_stm32f1.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/stm32f2/DoxygenLayout_stm32f2.xml b/doc/stm32f2/DoxygenLayout_stm32f2.xml
index f2bbfd41..cd23ccd2 100644
--- a/doc/stm32f2/DoxygenLayout_stm32f2.xml
+++ b/doc/stm32f2/DoxygenLayout_stm32f2.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/stm32f3/DoxygenLayout_stm32f3.xml b/doc/stm32f3/DoxygenLayout_stm32f3.xml
index 79fb29d4..996481fa 100644
--- a/doc/stm32f3/DoxygenLayout_stm32f3.xml
+++ b/doc/stm32f3/DoxygenLayout_stm32f3.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/stm32f4/DoxygenLayout_stm32f4.xml b/doc/stm32f4/DoxygenLayout_stm32f4.xml
index 7469ba16..58f014f0 100644
--- a/doc/stm32f4/DoxygenLayout_stm32f4.xml
+++ b/doc/stm32f4/DoxygenLayout_stm32f4.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/stm32l1/DoxygenLayout_stm32l1.xml b/doc/stm32l1/DoxygenLayout_stm32l1.xml
index 4c6e59e7..46fef450 100644
--- a/doc/stm32l1/DoxygenLayout_stm32l1.xml
+++ b/doc/stm32l1/DoxygenLayout_stm32l1.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>
diff --git a/doc/usb/DoxygenLayout_usb.xml b/doc/usb/DoxygenLayout_usb.xml
index 3773af81..befab617 100644
--- a/doc/usb/DoxygenLayout_usb.xml
+++ b/doc/usb/DoxygenLayout_usb.xml
@@ -21,6 +21,11 @@
     <tab type="user" visible="yes" url="../../efm32gg/html/modules.html" title="EFM32 Giant Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32lg/html/modules.html" title="EFM32 Leopard Gecko" intro=""/>
     <tab type="user" visible="yes" url="../../efm32tg/html/modules.html" title="EFM32 Tiny Gecko" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3a/html/modules.html" title="SAM3A" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3n/html/modules.html" title="SAM3N" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3s/html/modules.html" title="SAM3S" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3u/html/modules.html" title="SAM3U" intro=""/>
+    <tab type="user" visible="yes" url="../../sam3x/html/modules.html" title="SAM3X" intro=""/>
     <tab type="namespaces" visible="yes" title="">
       <tab type="namespaces" visible="yes" title="" intro=""/>
       <tab type="namespacemembers" visible="yes" title="" intro=""/>