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diff --git a/core/src/main/java/org/spongycastle/pqc/math/linearalgebra/IntegerFunctions.java b/core/src/main/java/org/spongycastle/pqc/math/linearalgebra/IntegerFunctions.java
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@@ -0,0 +1,1423 @@
+package org.spongycastle.pqc.math.linearalgebra;
+
+import java.math.BigInteger;
+import java.security.SecureRandom;
+
+/**
+ * Class of number-theory related functions for use with integers represented as
+ * <tt>int</tt>'s or <tt>BigInteger</tt> objects.
+ */
+public final class IntegerFunctions
+{
+
+ private static final BigInteger ZERO = BigInteger.valueOf(0);
+
+ private static final BigInteger ONE = BigInteger.valueOf(1);
+
+ private static final BigInteger TWO = BigInteger.valueOf(2);
+
+ private static final BigInteger FOUR = BigInteger.valueOf(4);
+
+ private static final int[] SMALL_PRIMES = {3, 5, 7, 11, 13, 17, 19, 23,
+ 29, 31, 37, 41};
+
+ private static final long SMALL_PRIME_PRODUCT = 3L * 5 * 7 * 11 * 13 * 17
+ * 19 * 23 * 29 * 31 * 37 * 41;
+
+ private static SecureRandom sr = null;
+
+ // the jacobi function uses this lookup table
+ private static final int[] jacobiTable = {0, 1, 0, -1, 0, -1, 0, 1};
+
+ private IntegerFunctions()
+ {
+ // empty
+ }
+
+ /**
+ * Computes the value of the Jacobi symbol (A|B). The following properties
+ * hold for the Jacobi symbol which makes it a very efficient way to
+ * evaluate the Legendre symbol
+ * <p>
+ * (A|B) = 0 IF gcd(A,B) &gt; 1<br>
+ * (-1|B) = 1 IF n = 1 (mod 1)<br>
+ * (-1|B) = -1 IF n = 3 (mod 4)<br>
+ * (A|B) (C|B) = (AC|B)<br>
+ * (A|B) (A|C) = (A|CB)<br>
+ * (A|B) = (C|B) IF A = C (mod B)<br>
+ * (2|B) = 1 IF N = 1 OR 7 (mod 8)<br>
+ * (2|B) = 1 IF N = 3 OR 5 (mod 8)
+ *
+ * @param A integer value
+ * @param B integer value
+ * @return value of the jacobi symbol (A|B)
+ */
+ public static int jacobi(BigInteger A, BigInteger B)
+ {
+ BigInteger a, b, v;
+ long k = 1;
+
+ k = 1;
+
+ // test trivial cases
+ if (B.equals(ZERO))
+ {
+ a = A.abs();
+ return a.equals(ONE) ? 1 : 0;
+ }
+
+ if (!A.testBit(0) && !B.testBit(0))
+ {
+ return 0;
+ }
+
+ a = A;
+ b = B;
+
+ if (b.signum() == -1)
+ { // b < 0
+ b = b.negate(); // b = -b
+ if (a.signum() == -1)
+ {
+ k = -1;
+ }
+ }
+
+ v = ZERO;
+ while (!b.testBit(0))
+ {
+ v = v.add(ONE); // v = v + 1
+ b = b.divide(TWO); // b = b/2
+ }
+
+ if (v.testBit(0))
+ {
+ k = k * jacobiTable[a.intValue() & 7];
+ }
+
+ if (a.signum() < 0)
+ { // a < 0
+ if (b.testBit(1))
+ {
+ k = -k; // k = -k
+ }
+ a = a.negate(); // a = -a
+ }
+
+ // main loop
+ while (a.signum() != 0)
+ {
+ v = ZERO;
+ while (!a.testBit(0))
+ { // a is even
+ v = v.add(ONE);
+ a = a.divide(TWO);
+ }
+ if (v.testBit(0))
+ {
+ k = k * jacobiTable[b.intValue() & 7];
+ }
+
+ if (a.compareTo(b) < 0)
+ { // a < b
+ // swap and correct intermediate result
+ BigInteger x = a;
+ a = b;
+ b = x;
+ if (a.testBit(1) && b.testBit(1))
+ {
+ k = -k;
+ }
+ }
+ a = a.subtract(b);
+ }
+
+ return b.equals(ONE) ? (int)k : 0;
+ }
+
+ /**
+ * Computes the square root of a BigInteger modulo a prime employing the
+ * Shanks-Tonelli algorithm.
+ *
+ * @param a value out of which we extract the square root
+ * @param p prime modulus that determines the underlying field
+ * @return a number <tt>b</tt> such that b<sup>2</sup> = a (mod p) if
+ * <tt>a</tt> is a quadratic residue modulo <tt>p</tt>.
+ * @throws NoQuadraticResidueException if <tt>a</tt> is a quadratic non-residue modulo <tt>p</tt>
+ */
+ public static BigInteger ressol(BigInteger a, BigInteger p)
+ throws IllegalArgumentException
+ {
+
+ BigInteger v = null;
+
+ if (a.compareTo(ZERO) < 0)
+ {
+ a = a.add(p);
+ }
+
+ if (a.equals(ZERO))
+ {
+ return ZERO;
+ }
+
+ if (p.equals(TWO))
+ {
+ return a;
+ }
+
+ // p = 3 mod 4
+ if (p.testBit(0) && p.testBit(1))
+ {
+ if (jacobi(a, p) == 1)
+ { // a quadr. residue mod p
+ v = p.add(ONE); // v = p+1
+ v = v.shiftRight(2); // v = v/4
+ return a.modPow(v, p); // return a^v mod p
+ // return --> a^((p+1)/4) mod p
+ }
+ throw new IllegalArgumentException("No quadratic residue: " + a + ", " + p);
+ }
+
+ long t = 0;
+
+ // initialization
+ // compute k and s, where p = 2^s (2k+1) +1
+
+ BigInteger k = p.subtract(ONE); // k = p-1
+ long s = 0;
+ while (!k.testBit(0))
+ { // while k is even
+ s++; // s = s+1
+ k = k.shiftRight(1); // k = k/2
+ }
+
+ k = k.subtract(ONE); // k = k - 1
+ k = k.shiftRight(1); // k = k/2
+
+ // initial values
+ BigInteger r = a.modPow(k, p); // r = a^k mod p
+
+ BigInteger n = r.multiply(r).remainder(p); // n = r^2 % p
+ n = n.multiply(a).remainder(p); // n = n * a % p
+ r = r.multiply(a).remainder(p); // r = r * a %p
+
+ if (n.equals(ONE))
+ {
+ return r;
+ }
+
+ // non-quadratic residue
+ BigInteger z = TWO; // z = 2
+ while (jacobi(z, p) == 1)
+ {
+ // while z quadratic residue
+ z = z.add(ONE); // z = z + 1
+ }
+
+ v = k;
+ v = v.multiply(TWO); // v = 2k
+ v = v.add(ONE); // v = 2k + 1
+ BigInteger c = z.modPow(v, p); // c = z^v mod p
+
+ // iteration
+ while (n.compareTo(ONE) == 1)
+ { // n > 1
+ k = n; // k = n
+ t = s; // t = s
+ s = 0;
+
+ while (!k.equals(ONE))
+ { // k != 1
+ k = k.multiply(k).mod(p); // k = k^2 % p
+ s++; // s = s + 1
+ }
+
+ t -= s; // t = t - s
+ if (t == 0)
+ {
+ throw new IllegalArgumentException("No quadratic residue: " + a + ", " + p);
+ }
+
+ v = ONE;
+ for (long i = 0; i < t - 1; i++)
+ {
+ v = v.shiftLeft(1); // v = 1 * 2^(t - 1)
+ }
+ c = c.modPow(v, p); // c = c^v mod p
+ r = r.multiply(c).remainder(p); // r = r * c % p
+ c = c.multiply(c).remainder(p); // c = c^2 % p
+ n = n.multiply(c).mod(p); // n = n * c % p
+ }
+ return r;
+ }
+
+ /**
+ * Computes the greatest common divisor of the two specified integers
+ *
+ * @param u - first integer
+ * @param v - second integer
+ * @return gcd(a, b)
+ */
+ public static int gcd(int u, int v)
+ {
+ return BigInteger.valueOf(u).gcd(BigInteger.valueOf(v)).intValue();
+ }
+
+ /**
+ * Extended euclidian algorithm (computes gcd and representation).
+ *
+ * @param a the first integer
+ * @param b the second integer
+ * @return <tt>(g,u,v)</tt>, where <tt>g = gcd(abs(a),abs(b)) = ua + vb</tt>
+ */
+ public static int[] extGCD(int a, int b)
+ {
+ BigInteger ba = BigInteger.valueOf(a);
+ BigInteger bb = BigInteger.valueOf(b);
+ BigInteger[] bresult = extgcd(ba, bb);
+ int[] result = new int[3];
+ result[0] = bresult[0].intValue();
+ result[1] = bresult[1].intValue();
+ result[2] = bresult[2].intValue();
+ return result;
+ }
+
+ public static BigInteger divideAndRound(BigInteger a, BigInteger b)
+ {
+ if (a.signum() < 0)
+ {
+ return divideAndRound(a.negate(), b).negate();
+ }
+ if (b.signum() < 0)
+ {
+ return divideAndRound(a, b.negate()).negate();
+ }
+ return a.shiftLeft(1).add(b).divide(b.shiftLeft(1));
+ }
+
+ public static BigInteger[] divideAndRound(BigInteger[] a, BigInteger b)
+ {
+ BigInteger[] out = new BigInteger[a.length];
+ for (int i = 0; i < a.length; i++)
+ {
+ out[i] = divideAndRound(a[i], b);
+ }
+ return out;
+ }
+
+ /**
+ * Compute the smallest integer that is greater than or equal to the
+ * logarithm to the base 2 of the given BigInteger.
+ *
+ * @param a the integer
+ * @return ceil[log(a)]
+ */
+ public static int ceilLog(BigInteger a)
+ {
+ int result = 0;
+ BigInteger p = ONE;
+ while (p.compareTo(a) < 0)
+ {
+ result++;
+ p = p.shiftLeft(1);
+ }
+ return result;
+ }
+
+ /**
+ * Compute the smallest integer that is greater than or equal to the
+ * logarithm to the base 2 of the given integer.
+ *
+ * @param a the integer
+ * @return ceil[log(a)]
+ */
+ public static int ceilLog(int a)
+ {
+ int log = 0;
+ int i = 1;
+ while (i < a)
+ {
+ i <<= 1;
+ log++;
+ }
+ return log;
+ }
+
+ /**
+ * Compute <tt>ceil(log_256 n)</tt>, the number of bytes needed to encode
+ * the integer <tt>n</tt>.
+ *
+ * @param n the integer
+ * @return the number of bytes needed to encode <tt>n</tt>
+ */
+ public static int ceilLog256(int n)
+ {
+ if (n == 0)
+ {
+ return 1;
+ }
+ int m;
+ if (n < 0)
+ {
+ m = -n;
+ }
+ else
+ {
+ m = n;
+ }
+
+ int d = 0;
+ while (m > 0)
+ {
+ d++;
+ m >>>= 8;
+ }
+ return d;
+ }
+
+ /**
+ * Compute <tt>ceil(log_256 n)</tt>, the number of bytes needed to encode
+ * the long integer <tt>n</tt>.
+ *
+ * @param n the long integer
+ * @return the number of bytes needed to encode <tt>n</tt>
+ */
+ public static int ceilLog256(long n)
+ {
+ if (n == 0)
+ {
+ return 1;
+ }
+ long m;
+ if (n < 0)
+ {
+ m = -n;
+ }
+ else
+ {
+ m = n;
+ }
+
+ int d = 0;
+ while (m > 0)
+ {
+ d++;
+ m >>>= 8;
+ }
+ return d;
+ }
+
+ /**
+ * Compute the integer part of the logarithm to the base 2 of the given
+ * integer.
+ *
+ * @param a the integer
+ * @return floor[log(a)]
+ */
+ public static int floorLog(BigInteger a)
+ {
+ int result = -1;
+ BigInteger p = ONE;
+ while (p.compareTo(a) <= 0)
+ {
+ result++;
+ p = p.shiftLeft(1);
+ }
+ return result;
+ }
+
+ /**
+ * Compute the integer part of the logarithm to the base 2 of the given
+ * integer.
+ *
+ * @param a the integer
+ * @return floor[log(a)]
+ */
+ public static int floorLog(int a)
+ {
+ int h = 0;
+ if (a <= 0)
+ {
+ return -1;
+ }
+ int p = a >>> 1;
+ while (p > 0)
+ {
+ h++;
+ p >>>= 1;
+ }
+
+ return h;
+ }
+
+ /**
+ * Compute the largest <tt>h</tt> with <tt>2^h | a</tt> if <tt>a!=0</tt>.
+ *
+ * @param a an integer
+ * @return the largest <tt>h</tt> with <tt>2^h | a</tt> if <tt>a!=0</tt>,
+ * <tt>0</tt> otherwise
+ */
+ public static int maxPower(int a)
+ {
+ int h = 0;
+ if (a != 0)
+ {
+ int p = 1;
+ while ((a & p) == 0)
+ {
+ h++;
+ p <<= 1;
+ }
+ }
+
+ return h;
+ }
+
+ /**
+ * @param a an integer
+ * @return the number of ones in the binary representation of an integer
+ * <tt>a</tt>
+ */
+ public static int bitCount(int a)
+ {
+ int h = 0;
+ while (a != 0)
+ {
+ h += a & 1;
+ a >>>= 1;
+ }
+
+ return h;
+ }
+
+ /**
+ * determines the order of g modulo p, p prime and 1 &lt; g &lt; p. This algorithm
+ * is only efficient for small p (see X9.62-1998, p. 68).
+ *
+ * @param g an integer with 1 &lt; g &lt; p
+ * @param p a prime
+ * @return the order k of g (that is k is the smallest integer with
+ * g<sup>k</sup> = 1 mod p
+ */
+ public static int order(int g, int p)
+ {
+ int b, j;
+
+ b = g % p; // Reduce g mod p first.
+ j = 1;
+
+ // Check whether g == 0 mod p (avoiding endless loop).
+ if (b == 0)
+ {
+ throw new IllegalArgumentException(g + " is not an element of Z/("
+ + p + "Z)^*; it is not meaningful to compute its order.");
+ }
+
+ // Compute the order of g mod p:
+ while (b != 1)
+ {
+ b *= g;
+ b %= p;
+ if (b < 0)
+ {
+ b += p;
+ }
+ j++;
+ }
+
+ return j;
+ }
+
+ /**
+ * Reduces an integer into a given interval
+ *
+ * @param n - the integer
+ * @param begin - left bound of the interval
+ * @param end - right bound of the interval
+ * @return <tt>n</tt> reduced into <tt>[begin,end]</tt>
+ */
+ public static BigInteger reduceInto(BigInteger n, BigInteger begin,
+ BigInteger end)
+ {
+ return n.subtract(begin).mod(end.subtract(begin)).add(begin);
+ }
+
+ /**
+ * Compute <tt>a<sup>e</sup></tt>.
+ *
+ * @param a the base
+ * @param e the exponent
+ * @return <tt>a<sup>e</sup></tt>
+ */
+ public static int pow(int a, int e)
+ {
+ int result = 1;
+ while (e > 0)
+ {
+ if ((e & 1) == 1)
+ {
+ result *= a;
+ }
+ a *= a;
+ e >>>= 1;
+ }
+ return result;
+ }
+
+ /**
+ * Compute <tt>a<sup>e</sup></tt>.
+ *
+ * @param a the base
+ * @param e the exponent
+ * @return <tt>a<sup>e</sup></tt>
+ */
+ public static long pow(long a, int e)
+ {
+ long result = 1;
+ while (e > 0)
+ {
+ if ((e & 1) == 1)
+ {
+ result *= a;
+ }
+ a *= a;
+ e >>>= 1;
+ }
+ return result;
+ }
+
+ /**
+ * Compute <tt>a<sup>e</sup> mod n</tt>.
+ *
+ * @param a the base
+ * @param e the exponent
+ * @param n the modulus
+ * @return <tt>a<sup>e</sup> mod n</tt>
+ */
+ public static int modPow(int a, int e, int n)
+ {
+ if (n <= 0 || (n * n) > Integer.MAX_VALUE || e < 0)
+ {
+ return 0;
+ }
+ int result = 1;
+ a = (a % n + n) % n;
+ while (e > 0)
+ {
+ if ((e & 1) == 1)
+ {
+ result = (result * a) % n;
+ }
+ a = (a * a) % n;
+ e >>>= 1;
+ }
+ return result;
+ }
+
+ /**
+ * Extended euclidian algorithm (computes gcd and representation).
+ *
+ * @param a - the first integer
+ * @param b - the second integer
+ * @return <tt>(d,u,v)</tt>, where <tt>d = gcd(a,b) = ua + vb</tt>
+ */
+ public static BigInteger[] extgcd(BigInteger a, BigInteger b)
+ {
+ BigInteger u = ONE;
+ BigInteger v = ZERO;
+ BigInteger d = a;
+ if (b.signum() != 0)
+ {
+ BigInteger v1 = ZERO;
+ BigInteger v3 = b;
+ while (v3.signum() != 0)
+ {
+ BigInteger[] tmp = d.divideAndRemainder(v3);
+ BigInteger q = tmp[0];
+ BigInteger t3 = tmp[1];
+ BigInteger t1 = u.subtract(q.multiply(v1));
+ u = v1;
+ d = v3;
+ v1 = t1;
+ v3 = t3;
+ }
+ v = d.subtract(a.multiply(u)).divide(b);
+ }
+ return new BigInteger[]{d, u, v};
+ }
+
+ /**
+ * Computation of the least common multiple of a set of BigIntegers.
+ *
+ * @param numbers - the set of numbers
+ * @return the lcm(numbers)
+ */
+ public static BigInteger leastCommonMultiple(BigInteger[] numbers)
+ {
+ int n = numbers.length;
+ BigInteger result = numbers[0];
+ for (int i = 1; i < n; i++)
+ {
+ BigInteger gcd = result.gcd(numbers[i]);
+ result = result.multiply(numbers[i]).divide(gcd);
+ }
+ return result;
+ }
+
+ /**
+ * Returns a long integer whose value is <tt>(a mod m</tt>). This method
+ * differs from <tt>%</tt> in that it always returns a <i>non-negative</i>
+ * integer.
+ *
+ * @param a value on which the modulo operation has to be performed.
+ * @param m the modulus.
+ * @return <tt>a mod m</tt>
+ */
+ public static long mod(long a, long m)
+ {
+ long result = a % m;
+ if (result < 0)
+ {
+ result += m;
+ }
+ return result;
+ }
+
+ /**
+ * Computes the modular inverse of an integer a
+ *
+ * @param a - the integer to invert
+ * @param mod - the modulus
+ * @return <tt>a<sup>-1</sup> mod n</tt>
+ */
+ public static int modInverse(int a, int mod)
+ {
+ return BigInteger.valueOf(a).modInverse(BigInteger.valueOf(mod))
+ .intValue();
+ }
+
+ /**
+ * Computes the modular inverse of an integer a
+ *
+ * @param a - the integer to invert
+ * @param mod - the modulus
+ * @return <tt>a<sup>-1</sup> mod n</tt>
+ */
+ public static long modInverse(long a, long mod)
+ {
+ return BigInteger.valueOf(a).modInverse(BigInteger.valueOf(mod))
+ .longValue();
+ }
+
+ /**
+ * Tests whether an integer <tt>a</tt> is power of another integer
+ * <tt>p</tt>.
+ *
+ * @param a - the first integer
+ * @param p - the second integer
+ * @return n if a = p^n or -1 otherwise
+ */
+ public static int isPower(int a, int p)
+ {
+ if (a <= 0)
+ {
+ return -1;
+ }
+ int n = 0;
+ int d = a;
+ while (d > 1)
+ {
+ if (d % p != 0)
+ {
+ return -1;
+ }
+ d /= p;
+ n++;
+ }
+ return n;
+ }
+
+ /**
+ * Find and return the least non-trivial divisor of an integer <tt>a</tt>.
+ *
+ * @param a - the integer
+ * @return divisor p &gt;1 or 1 if a = -1,0,1
+ */
+ public static int leastDiv(int a)
+ {
+ if (a < 0)
+ {
+ a = -a;
+ }
+ if (a == 0)
+ {
+ return 1;
+ }
+ if ((a & 1) == 0)
+ {
+ return 2;
+ }
+ int p = 3;
+ while (p <= (a / p))
+ {
+ if ((a % p) == 0)
+ {
+ return p;
+ }
+ p += 2;
+ }
+
+ return a;
+ }
+
+ /**
+ * Miller-Rabin-Test, determines wether the given integer is probably prime
+ * or composite. This method returns <tt>true</tt> if the given integer is
+ * prime with probability <tt>1 - 2<sup>-20</sup></tt>.
+ *
+ * @param n the integer to test for primality
+ * @return <tt>true</tt> if the given integer is prime with probability
+ * 2<sup>-100</sup>, <tt>false</tt> otherwise
+ */
+ public static boolean isPrime(int n)
+ {
+ if (n < 2)
+ {
+ return false;
+ }
+ if (n == 2)
+ {
+ return true;
+ }
+ if ((n & 1) == 0)
+ {
+ return false;
+ }
+ if (n < 42)
+ {
+ for (int i = 0; i < SMALL_PRIMES.length; i++)
+ {
+ if (n == SMALL_PRIMES[i])
+ {
+ return true;
+ }
+ }
+ }
+
+ if ((n % 3 == 0) || (n % 5 == 0) || (n % 7 == 0) || (n % 11 == 0)
+ || (n % 13 == 0) || (n % 17 == 0) || (n % 19 == 0)
+ || (n % 23 == 0) || (n % 29 == 0) || (n % 31 == 0)
+ || (n % 37 == 0) || (n % 41 == 0))
+ {
+ return false;
+ }
+
+ return BigInteger.valueOf(n).isProbablePrime(20);
+ }
+
+ /**
+ * Short trial-division test to find out whether a number is not prime. This
+ * test is usually used before a Miller-Rabin primality test.
+ *
+ * @param candidate the number to test
+ * @return <tt>true</tt> if the number has no factor of the tested primes,
+ * <tt>false</tt> if the number is definitely composite
+ */
+ public static boolean passesSmallPrimeTest(BigInteger candidate)
+ {
+ final int[] smallPrime = {2, 3, 5, 7, 11, 13, 17, 19, 23, 29, 31, 37,
+ 41, 43, 47, 53, 59, 61, 67, 71, 73, 79, 83, 89, 97, 101, 103,
+ 107, 109, 113, 127, 131, 137, 139, 149, 151, 157, 163, 167,
+ 173, 179, 181, 191, 193, 197, 199, 211, 223, 227, 229, 233,
+ 239, 241, 251, 257, 263, 269, 271, 277, 281, 283, 293, 307,
+ 311, 313, 317, 331, 337, 347, 349, 353, 359, 367, 373, 379,
+ 383, 389, 397, 401, 409, 419, 421, 431, 433, 439, 443, 449,
+ 457, 461, 463, 467, 479, 487, 491, 499, 503, 509, 521, 523,
+ 541, 547, 557, 563, 569, 571, 577, 587, 593, 599, 601, 607,
+ 613, 617, 619, 631, 641, 643, 647, 653, 659, 661, 673, 677,
+ 683, 691, 701, 709, 719, 727, 733, 739, 743, 751, 757, 761,
+ 769, 773, 787, 797, 809, 811, 821, 823, 827, 829, 839, 853,
+ 857, 859, 863, 877, 881, 883, 887, 907, 911, 919, 929, 937,
+ 941, 947, 953, 967, 971, 977, 983, 991, 997, 1009, 1013, 1019,
+ 1021, 1031, 1033, 1039, 1049, 1051, 1061, 1063, 1069, 1087,
+ 1091, 1093, 1097, 1103, 1109, 1117, 1123, 1129, 1151, 1153,
+ 1163, 1171, 1181, 1187, 1193, 1201, 1213, 1217, 1223, 1229,
+ 1231, 1237, 1249, 1259, 1277, 1279, 1283, 1289, 1291, 1297,
+ 1301, 1303, 1307, 1319, 1321, 1327, 1361, 1367, 1373, 1381,
+ 1399, 1409, 1423, 1427, 1429, 1433, 1439, 1447, 1451, 1453,
+ 1459, 1471, 1481, 1483, 1487, 1489, 1493, 1499};
+
+ for (int i = 0; i < smallPrime.length; i++)
+ {
+ if (candidate.mod(BigInteger.valueOf(smallPrime[i])).equals(
+ ZERO))
+ {
+ return false;
+ }
+ }
+ return true;
+ }
+
+ /**
+ * Returns the largest prime smaller than the given integer
+ *
+ * @param n - upper bound
+ * @return the largest prime smaller than <tt>n</tt>, or <tt>1</tt> if
+ * <tt>n &lt;= 2</tt>
+ */
+ public static int nextSmallerPrime(int n)
+ {
+ if (n <= 2)
+ {
+ return 1;
+ }
+
+ if (n == 3)
+ {
+ return 2;
+ }
+
+ if ((n & 1) == 0)
+ {
+ n--;
+ }
+ else
+ {
+ n -= 2;
+ }
+
+ while (n > 3 & !isPrime(n))
+ {
+ n -= 2;
+ }
+ return n;
+ }
+
+ /**
+ * Compute the next probable prime greater than <tt>n</tt> with the
+ * specified certainty.
+ *
+ * @param n a integer number
+ * @param certainty the certainty that the generated number is prime
+ * @return the next prime greater than <tt>n</tt>
+ */
+ public static BigInteger nextProbablePrime(BigInteger n, int certainty)
+ {
+
+ if (n.signum() < 0 || n.signum() == 0 || n.equals(ONE))
+ {
+ return TWO;
+ }
+
+ BigInteger result = n.add(ONE);
+
+ // Ensure an odd number
+ if (!result.testBit(0))
+ {
+ result = result.add(ONE);
+ }
+
+ while (true)
+ {
+ // Do cheap "pre-test" if applicable
+ if (result.bitLength() > 6)
+ {
+ long r = result.remainder(
+ BigInteger.valueOf(SMALL_PRIME_PRODUCT)).longValue();
+ if ((r % 3 == 0) || (r % 5 == 0) || (r % 7 == 0)
+ || (r % 11 == 0) || (r % 13 == 0) || (r % 17 == 0)
+ || (r % 19 == 0) || (r % 23 == 0) || (r % 29 == 0)
+ || (r % 31 == 0) || (r % 37 == 0) || (r % 41 == 0))
+ {
+ result = result.add(TWO);
+ continue; // Candidate is composite; try another
+ }
+ }
+
+ // All candidates of bitLength 2 and 3 are prime by this point
+ if (result.bitLength() < 4)
+ {
+ return result;
+ }
+
+ // The expensive test
+ if (result.isProbablePrime(certainty))
+ {
+ return result;
+ }
+
+ result = result.add(TWO);
+ }
+ }
+
+ /**
+ * Compute the next probable prime greater than <tt>n</tt> with the default
+ * certainty (20).
+ *
+ * @param n a integer number
+ * @return the next prime greater than <tt>n</tt>
+ */
+ public static BigInteger nextProbablePrime(BigInteger n)
+ {
+ return nextProbablePrime(n, 20);
+ }
+
+ /**
+ * Computes the next prime greater than n.
+ *
+ * @param n a integer number
+ * @return the next prime greater than n
+ */
+ public static BigInteger nextPrime(long n)
+ {
+ long i;
+ boolean found = false;
+ long result = 0;
+
+ if (n <= 1)
+ {
+ return BigInteger.valueOf(2);
+ }
+ if (n == 2)
+ {
+ return BigInteger.valueOf(3);
+ }
+
+ for (i = n + 1 + (n & 1); (i <= n << 1) && !found; i += 2)
+ {
+ for (long j = 3; (j <= i >> 1) && !found; j += 2)
+ {
+ if (i % j == 0)
+ {
+ found = true;
+ }
+ }
+ if (found)
+ {
+ found = false;
+ }
+ else
+ {
+ result = i;
+ found = true;
+ }
+ }
+ return BigInteger.valueOf(result);
+ }
+
+ /**
+ * Computes the binomial coefficient (n|t) ("n over t"). Formula:
+ * <ul>
+ * <li>if n !=0 and t != 0 then (n|t) = Mult(i=1, t): (n-(i-1))/i</li>
+ * <li>if t = 0 then (n|t) = 1</li>
+ * <li>if n = 0 and t &gt; 0 then (n|t) = 0</li>
+ * </ul>
+ *
+ * @param n - the "upper" integer
+ * @param t - the "lower" integer
+ * @return the binomialcoefficient "n over t" as BigInteger
+ */
+ public static BigInteger binomial(int n, int t)
+ {
+
+ BigInteger result = ONE;
+
+ if (n == 0)
+ {
+ if (t == 0)
+ {
+ return result;
+ }
+ return ZERO;
+ }
+
+ // the property (n|t) = (n|n-t) be used to reduce numbers of operations
+ if (t > (n >>> 1))
+ {
+ t = n - t;
+ }
+
+ for (int i = 1; i <= t; i++)
+ {
+ result = (result.multiply(BigInteger.valueOf(n - (i - 1))))
+ .divide(BigInteger.valueOf(i));
+ }
+
+ return result;
+ }
+
+ public static BigInteger randomize(BigInteger upperBound)
+ {
+ if (sr == null)
+ {
+ sr = new SecureRandom();
+ }
+ return randomize(upperBound, sr);
+ }
+
+ public static BigInteger randomize(BigInteger upperBound,
+ SecureRandom prng)
+ {
+ int blen = upperBound.bitLength();
+ BigInteger randomNum = BigInteger.valueOf(0);
+
+ if (prng == null)
+ {
+ prng = sr != null ? sr : new SecureRandom();
+ }
+
+ for (int i = 0; i < 20; i++)
+ {
+ randomNum = new BigInteger(blen, prng);
+ if (randomNum.compareTo(upperBound) < 0)
+ {
+ return randomNum;
+ }
+ }
+ return randomNum.mod(upperBound);
+ }
+
+ /**
+ * Extract the truncated square root of a BigInteger.
+ *
+ * @param a - value out of which we extract the square root
+ * @return the truncated square root of <tt>a</tt>
+ */
+ public static BigInteger squareRoot(BigInteger a)
+ {
+ int bl;
+ BigInteger result, remainder, b;
+
+ if (a.compareTo(ZERO) < 0)
+ {
+ throw new ArithmeticException(
+ "cannot extract root of negative number" + a + ".");
+ }
+
+ bl = a.bitLength();
+ result = ZERO;
+ remainder = ZERO;
+
+ // if the bit length is odd then extra step
+ if ((bl & 1) != 0)
+ {
+ result = result.add(ONE);
+ bl--;
+ }
+
+ while (bl > 0)
+ {
+ remainder = remainder.multiply(FOUR);
+ remainder = remainder.add(BigInteger.valueOf((a.testBit(--bl) ? 2
+ : 0)
+ + (a.testBit(--bl) ? 1 : 0)));
+ b = result.multiply(FOUR).add(ONE);
+ result = result.multiply(TWO);
+ if (remainder.compareTo(b) != -1)
+ {
+ result = result.add(ONE);
+ remainder = remainder.subtract(b);
+ }
+ }
+
+ return result;
+ }
+
+ /**
+ * Takes an approximation of the root from an integer base, using newton's
+ * algorithm
+ *
+ * @param base the base to take the root from
+ * @param root the root, for example 2 for a square root
+ */
+ public static float intRoot(int base, int root)
+ {
+ float gNew = base / root;
+ float gOld = 0;
+ int counter = 0;
+ while (Math.abs(gOld - gNew) > 0.0001)
+ {
+ float gPow = floatPow(gNew, root);
+ while (Float.isInfinite(gPow))
+ {
+ gNew = (gNew + gOld) / 2;
+ gPow = floatPow(gNew, root);
+ }
+ counter += 1;
+ gOld = gNew;
+ gNew = gOld - (gPow - base) / (root * floatPow(gOld, root - 1));
+ }
+ return gNew;
+ }
+
+ /**
+ * Calculation of a logarithmus of a float param
+ *
+ * @param param
+ * @return
+ */
+ public static float floatLog(float param)
+ {
+ double arg = (param - 1) / (param + 1);
+ double arg2 = arg;
+ int counter = 1;
+ float result = (float)arg;
+
+ while (arg2 > 0.001)
+ {
+ counter += 2;
+ arg2 *= arg * arg;
+ result += (1. / counter) * arg2;
+ }
+ return 2 * result;
+ }
+
+ /**
+ * int power of a base float, only use for small ints
+ *
+ * @param f
+ * @param i
+ * @return
+ */
+ public static float floatPow(float f, int i)
+ {
+ float g = 1;
+ for (; i > 0; i--)
+ {
+ g *= f;
+ }
+ return g;
+ }
+
+ /**
+ * calculate the logarithm to the base 2.
+ *
+ * @param x any double value
+ * @return log_2(x)
+ * @deprecated use MathFunctions.log(double) instead
+ */
+ public static double log(double x)
+ {
+ if (x > 0 && x < 1)
+ {
+ double d = 1 / x;
+ double result = -log(d);
+ return result;
+ }
+
+ int tmp = 0;
+ double tmp2 = 1;
+ double d = x;
+
+ while (d > 2)
+ {
+ d = d / 2;
+ tmp += 1;
+ tmp2 *= 2;
+ }
+ double rem = x / tmp2;
+ rem = logBKM(rem);
+ return tmp + rem;
+ }
+
+ /**
+ * calculate the logarithm to the base 2.
+ *
+ * @param x any long value &gt;=1
+ * @return log_2(x)
+ * @deprecated use MathFunctions.log(long) instead
+ */
+ public static double log(long x)
+ {
+ int tmp = floorLog(BigInteger.valueOf(x));
+ long tmp2 = 1 << tmp;
+ double rem = (double)x / (double)tmp2;
+ rem = logBKM(rem);
+ return tmp + rem;
+ }
+
+ /**
+ * BKM Algorithm to calculate logarithms to the base 2.
+ *
+ * @param arg a double value with 1<= arg<= 4.768462058
+ * @return log_2(arg)
+ * @deprecated use MathFunctions.logBKM(double) instead
+ */
+ private static double logBKM(double arg)
+ {
+ double ae[] = // A_e[k] = log_2 (1 + 0.5^k)
+ {
+ 1.0000000000000000000000000000000000000000000000000000000000000000000000000000,
+ 0.5849625007211561814537389439478165087598144076924810604557526545410982276485,
+ 0.3219280948873623478703194294893901758648313930245806120547563958159347765589,
+ 0.1699250014423123629074778878956330175196288153849621209115053090821964552970,
+ 0.0874628412503394082540660108104043540112672823448206881266090643866965081686,
+ 0.0443941193584534376531019906736094674630459333742491317685543002674288465967,
+ 0.0223678130284545082671320837460849094932677948156179815932199216587899627785,
+ 0.0112272554232541203378805844158839407281095943600297940811823651462712311786,
+ 0.0056245491938781069198591026740666017211096815383520359072957784732489771013,
+ 0.0028150156070540381547362547502839489729507927389771959487826944878598909400,
+ 0.0014081943928083889066101665016890524233311715793462235597709051792834906001,
+ 0.0007042690112466432585379340422201964456668872087249334581924550139514213168,
+ 0.0003521774803010272377989609925281744988670304302127133979341729842842377649,
+ 0.0001760994864425060348637509459678580940163670081839283659942864068257522373,
+ 0.0000880524301221769086378699983597183301490534085738474534831071719854721939,
+ 0.0000440268868273167176441087067175806394819146645511899503059774914593663365,
+ 0.0000220136113603404964890728830697555571275493801909791504158295359319433723,
+ 0.0000110068476674814423006223021573490183469930819844945565597452748333526464,
+ 0.0000055034343306486037230640321058826431606183125807276574241540303833251704,
+ 0.0000027517197895612831123023958331509538486493412831626219340570294203116559,
+ 0.0000013758605508411382010566802834037147561973553922354232704569052932922954,
+ 0.0000006879304394358496786728937442939160483304056131990916985043387874690617,
+ 0.0000003439652607217645360118314743718005315334062644619363447395987584138324,
+ 0.0000001719826406118446361936972479533123619972434705828085978955697643547921,
+ 0.0000000859913228686632156462565208266682841603921494181830811515318381744650,
+ 0.0000000429956620750168703982940244684787907148132725669106053076409624949917,
+ 0.0000000214978311976797556164155504126645192380395989504741781512309853438587,
+ 0.0000000107489156388827085092095702361647949603617203979413516082280717515504,
+ 0.0000000053744578294520620044408178949217773318785601260677517784797554422804,
+ 0.0000000026872289172287079490026152352638891824761667284401180026908031182361,
+ 0.0000000013436144592400232123622589569799954658536700992739887706412976115422,
+ 0.0000000006718072297764289157920422846078078155859484240808550018085324187007,
+ 0.0000000003359036149273187853169587152657145221968468364663464125722491530858,
+ 0.0000000001679518074734354745159899223037458278711244127245990591908996412262,
+ 0.0000000000839759037391617577226571237484864917411614198675604731728132152582,
+ 0.0000000000419879518701918839775296677020135040214077417929807824842667285938,
+ 0.0000000000209939759352486932678195559552767641474249812845414125580747434389,
+ 0.0000000000104969879676625344536740142096218372850561859495065136990936290929,
+ 0.0000000000052484939838408141817781356260462777942148580518406975851213868092,
+ 0.0000000000026242469919227938296243586262369156865545638305682553644113887909,
+ 0.0000000000013121234959619935994960031017850191710121890821178731821983105443,
+ 0.0000000000006560617479811459709189576337295395590603644549624717910616347038,
+ 0.0000000000003280308739906102782522178545328259781415615142931952662153623493,
+ 0.0000000000001640154369953144623242936888032768768777422997704541618141646683,
+ 0.0000000000000820077184976595619616930350508356401599552034612281802599177300,
+ 0.0000000000000410038592488303636807330652208397742314215159774270270147020117,
+ 0.0000000000000205019296244153275153381695384157073687186580546938331088730952,
+ 0.0000000000000102509648122077001764119940017243502120046885379813510430378661,
+ 0.0000000000000051254824061038591928917243090559919209628584150482483994782302,
+ 0.0000000000000025627412030519318726172939815845367496027046030028595094737777,
+ 0.0000000000000012813706015259665053515049475574143952543145124550608158430592,
+ 0.0000000000000006406853007629833949364669629701200556369782295210193569318434,
+ 0.0000000000000003203426503814917330334121037829290364330169106716787999052925,
+ 0.0000000000000001601713251907458754080007074659337446341494733882570243497196,
+ 0.0000000000000000800856625953729399268240176265844257044861248416330071223615,
+ 0.0000000000000000400428312976864705191179247866966320469710511619971334577509,
+ 0.0000000000000000200214156488432353984854413866994246781519154793320684126179,
+ 0.0000000000000000100107078244216177339743404416874899847406043033792202127070,
+ 0.0000000000000000050053539122108088756700751579281894640362199287591340285355,
+ 0.0000000000000000025026769561054044400057638132352058574658089256646014899499,
+ 0.0000000000000000012513384780527022205455634651853807110362316427807660551208,
+ 0.0000000000000000006256692390263511104084521222346348012116229213309001913762,
+ 0.0000000000000000003128346195131755552381436585278035120438976487697544916191,
+ 0.0000000000000000001564173097565877776275512286165232838833090480508502328437,
+ 0.0000000000000000000782086548782938888158954641464170239072244145219054734086,
+ 0.0000000000000000000391043274391469444084776945327473574450334092075712154016,
+ 0.0000000000000000000195521637195734722043713378812583900953755962557525252782,
+ 0.0000000000000000000097760818597867361022187915943503728909029699365320287407,
+ 0.0000000000000000000048880409298933680511176764606054809062553340323879609794,
+ 0.0000000000000000000024440204649466840255609083961603140683286362962192177597,
+ 0.0000000000000000000012220102324733420127809717395445504379645613448652614939,
+ 0.0000000000000000000006110051162366710063906152551383735699323415812152114058,
+ 0.0000000000000000000003055025581183355031953399739107113727036860315024588989,
+ 0.0000000000000000000001527512790591677515976780735407368332862218276873443537,
+ 0.0000000000000000000000763756395295838757988410584167137033767056170417508383,
+ 0.0000000000000000000000381878197647919378994210346199431733717514843471513618,
+ 0.0000000000000000000000190939098823959689497106436628681671067254111334889005,
+ 0.0000000000000000000000095469549411979844748553534196582286585751228071408728,
+ 0.0000000000000000000000047734774705989922374276846068851506055906657137209047,
+ 0.0000000000000000000000023867387352994961187138442777065843718711089344045782,
+ 0.0000000000000000000000011933693676497480593569226324192944532044984865894525,
+ 0.0000000000000000000000005966846838248740296784614396011477934194852481410926,
+ 0.0000000000000000000000002983423419124370148392307506484490384140516252814304,
+ 0.0000000000000000000000001491711709562185074196153830361933046331030629430117,
+ 0.0000000000000000000000000745855854781092537098076934460888486730708440475045,
+ 0.0000000000000000000000000372927927390546268549038472050424734256652501673274,
+ 0.0000000000000000000000000186463963695273134274519237230207489851150821191330,
+ 0.0000000000000000000000000093231981847636567137259618916352525606281553180093,
+ 0.0000000000000000000000000046615990923818283568629809533488457973317312233323,
+ 0.0000000000000000000000000023307995461909141784314904785572277779202790023236,
+ 0.0000000000000000000000000011653997730954570892157452397493151087737428485431,
+ 0.0000000000000000000000000005826998865477285446078726199923328593402722606924,
+ 0.0000000000000000000000000002913499432738642723039363100255852559084863397344,
+ 0.0000000000000000000000000001456749716369321361519681550201473345138307215067,
+ 0.0000000000000000000000000000728374858184660680759840775119123438968122488047,
+ 0.0000000000000000000000000000364187429092330340379920387564158411083803465567,
+ 0.0000000000000000000000000000182093714546165170189960193783228378441837282509,
+ 0.0000000000000000000000000000091046857273082585094980096891901482445902524441,
+ 0.0000000000000000000000000000045523428636541292547490048446022564529197237262,
+ 0.0000000000000000000000000000022761714318270646273745024223029238091160103901};
+ int n = 53;
+ double x = 1;
+ double y = 0;
+ double z;
+ double s = 1;
+ int k;
+
+ for (k = 0; k < n; k++)
+ {
+ z = x + x * s;
+ if (z <= arg)
+ {
+ x = z;
+ y += ae[k];
+ }
+ s *= 0.5;
+ }
+ return y;
+ }
+
+ public static boolean isIncreasing(int[] a)
+ {
+ for (int i = 1; i < a.length; i++)
+ {
+ if (a[i - 1] >= a[i])
+ {
+ System.out.println("a[" + (i - 1) + "] = " + a[i - 1] + " >= "
+ + a[i] + " = a[" + i + "]");
+ return false;
+ }
+ }
+ return true;
+ }
+
+ public static byte[] integerToOctets(BigInteger val)
+ {
+ byte[] valBytes = val.abs().toByteArray();
+
+ // check whether the array includes a sign bit
+ if ((val.bitLength() & 7) != 0)
+ {
+ return valBytes;
+ }
+ // get rid of the sign bit (first byte)
+ byte[] tmp = new byte[val.bitLength() >> 3];
+ System.arraycopy(valBytes, 1, tmp, 0, tmp.length);
+ return tmp;
+ }
+
+ public static BigInteger octetsToInteger(byte[] data, int offset,
+ int length)
+ {
+ byte[] val = new byte[length + 1];
+
+ val[0] = 0;
+ System.arraycopy(data, offset, val, 1, length);
+ return new BigInteger(val);
+ }
+
+ public static BigInteger octetsToInteger(byte[] data)
+ {
+ return octetsToInteger(data, 0, data.length);
+ }
+
+ public static void main(String[] args)
+ {
+ System.out.println("test");
+ // System.out.println(intRoot(37, 5));
+ // System.out.println(floatPow((float)2.5, 4));
+ System.out.println(floatLog(10));
+ System.out.println("test2");
+ }
+}